Evidence map›Paper›PMID 33213062›Full record

ArticleInternational journal of molecular sciences2020

Kinome Array Profiling of Patient-Derived Pancreatic Ductal Adenocarcinoma Identifies Differentially Active Protein Tyrosine Kinases.

Justin F Creeden, Khaled Alganem, Ali S Imami, F Charles Brunicardi, Shi-He Liu, Rammohan Shukla, Tushar Tomar, Faris Naji, Robert E McCullumsmith

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.9field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 39 citations in OpenAlex.

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  10. Insulin receptor responsiveness governs TGFβ-induced hepatic stellate cell activation: Insulin resistance instigates liver fibrosis.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
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  18. Loss of hepatic PPARα in mice causes hypertension and cardiovascular disease.American journal of physiology. Regulatory, integrative and comparative physiology · 2023
    Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Justin F CreedenDepartment of Neurosciences, College of Medicine and Life Sciences, University of Toledo, Toledo, OH 43614, USA.ORCID 0000-0003-3123-8401
Khaled AlganemDepartment of Neurosciences, College of Medicine and Life Sciences, University of Toledo, Toledo, OH 43614, USA.
Ali S ImamiDepartment of Neurosciences, College of Medicine and Life Sciences, University of Toledo, Toledo, OH 43614, USA.ORCID 0000-0003-3684-3539
F Charles BrunicardiDepartment of Cancer Biology, College of Medicine and Life Sciences, University of Toledo, Toledo, OH 43614, USA.
Shi-He LiuDepartment of Cancer Biology, College of Medicine and Life Sciences, University of Toledo, Toledo, OH 43614, USA.
Rammohan ShuklaDepartment of Neurosciences, College of Medicine and Life Sciences, University of Toledo, Toledo, OH 43614, USA.
Tushar TomarPamGene International BV, 5200 BJ's-Hertogenbosch, The Netherlands.ORCID 0000-0002-3344-7605
Faris NajiPamGene International BV, 5200 BJ's-Hertogenbosch, The Netherlands.
Robert E McCullumsmithDepartment of Neurosciences, College of Medicine and Life Sciences, University of Toledo, Toledo, OH 43614, USA.
University of Toledo · USPamGene (Netherlands) · NLNeurosciences Institute · US

Funding

Cell-specific analysis of sub-kinomes in schizophreniaR01MH107487 · NIMH · UNIVERSITY OF TOLEDO HEALTH SCI CAMPUS · PI MCCULLUMSMITH, ROBERT E, MELLER, JAREK · 2016 to 2020
$1.9M
NIH HHS NIH R01 AG057598NIH HHS NIMH R01 MH121102NIMH NIH HHS NIMH R01 MH107487
6 · The paper itself

Abstract

Pancreatic cancer remains one of the most difficult malignancies to treat. Minimal improvements in patient outcomes and persistently abysmal patient survival rates underscore the great need for new treatment strategies. Currently, there is intense interest in therapeutic strategies that target tyrosine protein kinases. Here, we employed kinome arrays and bioinformatic pipelines capable of identifying differentially active protein tyrosine kinases in different patient-derived pancreatic ductal adenocarcinoma (PDAC) cell lines and wild-type pancreatic tissue to investigate the unique kinomic networks of PDAC samples and posit novel target kinases for pancreatic cancer therapy. Consistent with previously described reports, the resultant peptide-based kinome array profiles identified increased protein tyrosine kinase activity in pancreatic cancer for the following kinases: epidermal growth factor receptor (EGFR), fms related receptor tyrosine kinase 4/vascular endothelial growth factor receptor 3 (FLT4/VEGFR-3), insulin receptor (INSR), ephrin receptor A2 (EPHA2), platelet derived growth factor receptor alpha (PDGFRA), SRC proto-oncogene kinase (SRC), and tyrosine kinase non receptor 2 (TNK2). Furthermore, this study identified increased activity for protein tyrosine kinases with limited prior evidence of differential activity in pancreatic cancer. These protein tyrosine kinases include B lymphoid kinase (BLK), Fyn-related kinase (FRK), Lck/Yes-related novel kinase (LYN), FYN proto-oncogene kinase (FYN), lymphocyte cell-specific kinase (LCK), tec protein kinase (TEC), hemopoietic cell kinase (HCK), ABL proto-oncogene 2 kinase (ABL2), discoidin domain receptor 1 kinase (DDR1), and ephrin receptor A8 kinase (EPHA8). Together, these results support the utility of peptide array kinomic analyses in the generation of potential candidate kinases for future pancreatic cancer therapeutic development.

Indexed as

Gene Expression ProfilingGene Expression Regulation, EnzymologicGene Expression Regulation, NeoplasticCarcinoma, Pancreatic DuctalHumansNeoplasm ProteinsPancreatic NeoplasmsProtein-Tyrosine KinasesProto-Oncogene MasMAS1 protein, humanNeoplasm ProteinsProtein-Tyrosine KinasesProto-Oncogene Mascancer metabolismdesmoplasiafibrosisinflammationkinase inhibitorskinase signatureskinomic networkspancreatic cancerpeptide arraytranscription factors

Identifiers

PMID33213062
PMCPMC7698519
OpenAlexW3104378422

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.