Evidence map›Paper›PMID 33211750›Full record

ArticlePloS one2020

Molecular analysis of cyclic α-maltosyl-(1→6)-maltose binding protein in the bacterial metabolic pathway.

Masaki Kohno, Takatoshi Arakawa, Naoki Sunagawa, Tetsuya Mori, Kiyohiko Igarashi, Tomoyuki Nishimoto, Shinya Fushinobu

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
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  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Masaki KohnoDepartment of Biotechnology, The University of Tokyo, Tokyo, Japan.
Takatoshi ArakawaDepartment of Biotechnology, The University of Tokyo, Tokyo, Japan.ORCID 0000-0001-6496-5440
Naoki SunagawaDepartment of Biomaterial Sciences, The University of Tokyo, Tokyo, Japan.
Tetsuya MoriR&D Division, HAYASHIBARA CO., LTD., Okayama, Japan.
Kiyohiko IgarashiDepartment of Biomaterial Sciences, The University of Tokyo, Tokyo, Japan.
Tomoyuki NishimotoR&D Division, HAYASHIBARA CO., LTD., Okayama, Japan.
Shinya FushinobuDepartment of Biotechnology, The University of Tokyo, Tokyo, Japan.ORCID 0000-0003-1346-6435
The University of Tokyo · JPHayashibara (Japan) · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cyclic α-maltosyl-(1→6)-maltose (CMM) is a cyclic glucotetrasaccharide with alternating α-1,4 and α-1,6 linkages. Here, we report functional and structural analyses on CMM-binding protein (CMMBP), which is a substrate-binding protein (SBP) of an ABC importer system of the bacteria Arthrobacter globiformis. Isothermal titration calorimetry analysis revealed that CMMBP specifically bound to CMM with a Kd value of 9.6 nM. The crystal structure of CMMBP was determined at a resolution of 1.47 Å, and a panose molecule was bound in a cleft between two domains. To delineate its structural features, the crystal structure of CMMBP was compared with other SBPs specific for carbohydrates, such as cyclic α-nigerosyl-(1→6)-nigerose and cyclodextrins. These results indicate that A. globiformis has a unique metabolic pathway specialized for CMM.

Indexed as

ArthrobacterCalorimetryCrystallography, X-RayCyclodextrinsDisaccharidesMaltose-Binding ProteinsMetabolic Networks and PathwaysModels, MolecularProtein ConformationProtein DomainsCyclodextrinsDisaccharideslaminaribioseMaltose-Binding Proteins

Identifiers

PMID33211750
PMCPMC7676653
OpenAlexW3104341848

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.