Evidence map›Paper›PMID 33209834›Full record

ArticleJournal of family medicine and primary care2020

Utility of nested polymerase chain reaction for fungus in detecting clinically suspected patients of invasive fungal infections and its clinical correlation and comparison with fungal culture.

Vibhu Ranjan Khare, Munesh Kumar Gupta, Nilesh Kumar, Ranjan Bhattnagar, Ragini Tilak, Kailash Kumar, Chandan Kumar, Anurag Rana

Open access · goldAbstract read
In one paragraph

Article in Journal of family medicine and primary care, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.0field-weighted citation impact, top 59% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Vibhu Ranjan KhareDepartment of General Medicine, IMS, BHU, Varanasi, Uttar Pradesh, India.
Munesh Kumar GuptaDepartment of Microbiology, IMS, BHU, Varanasi, Uttar Pradesh, India.
Nilesh KumarDepartment of General Medicine, IMS, BHU, Varanasi, Uttar Pradesh, India.
Ranjan BhattnagarDepartment of General Medicine, IMS, BHU, Varanasi, Uttar Pradesh, India.
Ragini TilakDepartment of Microbiology, IMS, BHU, Varanasi, Uttar Pradesh, India.
Kailash KumarDepartment of General Medicine, IMS, BHU, Varanasi, Uttar Pradesh, India.
Chandan KumarDepartment of General Medicine, IMS, BHU, Varanasi, Uttar Pradesh, India.
Anurag RanaDepartment of General Medicine, IMS, BHU, Varanasi, Uttar Pradesh, India.
Institute of Medical Sciences · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

AIMS AND

objectivesThe aim and objective of this study is to detect invasive fungal infections (IFIs) early and with more sensitivity by the nested polymerase chain reaction (PCR) for fungus as compared to fungal culture in clinically suspected patients and also explore its correlation in reference to age, duration of symptoms, immunocompromised status, and other risk factors predisposing to IFIs. MATERIALS AND

methodsIn this cross-sectional study, 50 suspected patients admitted in medical acute care unit/intensive care unit (ACU/ICU) of Sir Sunderlal Hospital, Banaras Hindu University, Varanasi, India, comprised the study. All cases were selected based on the predefined inclusion and exclusion criteria. A detailed history, clinical examination, and all required investigations were done in all suspected patients. Blood samples were taken for nested-PCR for fungus and culture. Nested PCR was performed on extracted DNA form samples collected from all participants under the study.

resultsOur study comprised of 50 suspected immunocompromised patients of IFIs. Among the participants under the study, the most common risk factor was diabetes mellitus (28% cases). Nearly two-thirds (60%) of the cases were 50 years or more. Around 70% of the cases had a history of illness more than 2 weeks. Nested PCR for fungus came out to be positive in 21/50 patients (42%); however, fungal culture was positive in none. Among the admitted patient in ACU/ICU, 75% were neutropenic.

conclusionsIFIs are more common in immunocompromised individuals, patients with comorbidities, long history of symptoms, and elderly population. Nested PCR for fungus has a high sensitivity (as compared to the fungal culture), and also they are rapid in giving the results. Thus, nested PCR for fungus can be used in a cost-effective manner for the early and reliable diagnosis of clinically suspected IFIs.

Indexed as

Febrile neutropeniainvasive fungal infectionpolymerase chain reaction

Identifiers

PMID33209834
PMCPMC7652180
OpenAlexW3087792619

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.