Evidence map›Paper›PMID 33208882›Full record

ArticleModern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc2021

TFEB rearranged renal cell carcinoma. A clinicopathologic and molecular study of 13 cases. Tumors harboring MALAT1-TFEB, ACTB-TFEB, and the novel NEAT1-TFEB translocations constantly express PDL1.

Anna Caliò, Shuko Harada, Matteo Brunelli, Serena Pedron, Diego Segala, Sofia Canete Portillo, Cristina Magi-Galluzzi, George J Netto, Alexander C Mackinnon, Guido Martignoni

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Article in Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 48 citations in OpenAlex.

  1. Cancers · 2026
    Review
  2. Molecularly defined renal cell carcinomas.Reports of practical oncology and radiotherapy : journal of Greatpoland Cancer Center in Poznan and Polish Society of Radiation Oncology · 2026
    Review
  3. Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. Review
  9. Genomic alterations and diagnosis of renal cancer.Virchows Archiv : an international journal of pathology · 2024
    Review
  10. Review
  11. Review
  12. IJU case reports · 2023
    Article
  13. Article
  14. Article
  15. Article
  16. A primary rectal neoplasm with novel DDX5-TFEB fusion.Virchows Archiv : an international journal of pathology · 2022
    Article
  17. Review
  18. Review
  19. Review
  20. Diagnostic utility of one-stop fusion gene panel to detect TFE3/TFEB gene rearrangement and amplification in renal cell carcinomas.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Anna CaliòDepartment of Diagnostic and Public Health, Section of Pathology, University of Verona, Verona, Italy.ORCID http://orcid.org/0000-0001-7352-6327
Shuko HaradaDepartment of Pathology, University of Alabama at Birmingham, Birmingham, AL, USA.
Matteo BrunelliDepartment of Diagnostic and Public Health, Section of Pathology, University of Verona, Verona, Italy.
Serena PedronDepartment of Diagnostic and Public Health, Section of Pathology, University of Verona, Verona, Italy.
Diego SegalaDepartment of Pathology, ASST Spedali Civili of Brescia, Brescia, Italy.
Sofia Canete PortilloDepartment of Pathology, University of Alabama at Birmingham, Birmingham, AL, USA.
Cristina Magi-GalluzziDepartment of Pathology, University of Alabama at Birmingham, Birmingham, AL, USA.
George J NettoDepartment of Pathology, University of Alabama at Birmingham, Birmingham, AL, USA.ORCID http://orcid.org/0000-0003-3915-9134
Alexander C MackinnonDepartment of Pathology, University of Alabama at Birmingham, Birmingham, AL, USA.ORCID http://orcid.org/0000-0002-2036-8529
Guido MartignoniDepartment of Diagnostic and Public Health, Section of Pathology, University of Verona, Verona, Italy. guido.martignoni@univr.it.ORCID http://orcid.org/0000-0002-7761-7274
University of Alabama at Birmingham · USUniversity of Verona · ITAzienda Socio Sanitaria Territoriale degli Spedali Civili di Brescia · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Renal cell carcinomas with t(6;11) chromosome translocation has been classically characterized by the rearrangement of the TFEB gene, located on chromosome 6, and MALAT1 gene, located on chromosome 11. Recently, a few other genes have been described as fusion partners in TFEB rearranged renal cell carcinomas. Although most of TFEB rearranged renal cell carcinomas have an indolent behavior, in the rare cases of advanced metastatic disease targeted therapy and predictive markers remain lacking. In the present study, we collected 13 TFEB rearranged renal cell carcinomas, confirmed by FISH, analyzing their morphology and exploring the novel gene partners. Looking for predictive markers, we have also performed PDL1 immunohistochemical analysis by using four different assays (E1L3N, 22C3, SP142, and SP263). MALAT1 gene rearrangement has been found in ten tumors, five cases showing classical biphasic morphology with "rosettes", five cases without "rosettes" mimicking other renal cell carcinomas or epithelioid angiomyolipoma/pure epithelioid PEComa. We identified two different partner genes, ACTB and NEAT1, the latter previously unreported and occurring in a tumor with an unusual solid and cystic appearance. In both cases, the "rosettes" were absent. In one case no gene partner was identified. Overall, in 12 of 13 TFEB-rearranged renal cell carcinomas staining for PDL1 SP263 was observed, whereas the other antibodies were less reliable or more difficult to interpret. In conclusion, we described the third case of ACTB-TFEB rearranged renal cell carcinoma and a novel NEAT1-TFEB rearranged renal cell carcinoma, both without the distinctive biphasic morphology typical of t(6;11) renal cell carcinoma. Finally, PDL1 SP263 was constantly expressed in TFEB rearranged renal cell carcinoma with possible clinical benefit which requires further investigations.

Indexed as

Biomarkers, TumorGene FusionGene RearrangementTranslocation, GeneticActinsAdultAgedAged, 80 and overB7-H1 AntigenBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsCarcinoma, Renal CellFemaleHumansKidney NeoplasmsMaleMiddle AgedActinsB7-H1 AntigenBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsBiomarkers, TumorCD274 protein, humanMALAT1 long non-coding RNA, humanNEAT1 long non-coding RNA, humanRNA, Long NoncodingTFEB protein, human

Identifiers

PMID33208882
OpenAlexW3103094659

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.