Evidence map›Paper›PMID 33208771›Full record

ArticleScientific reports2020

RNA sequencing as an alternative tool for detecting measurable residual disease in core-binding factor acute myeloid leukemia.

TaeHyung Kim, Joon Ho Moon, Jae-Sook Ahn, Seo-Yeon Ahn, Sung-Hoon Jung, Deok-Hwan Yang, Je-Jung Lee, Myung-Geun Shin, Seung Hyun Choi, Ja-Yeon Lee and 11 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Review
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  4. Molecular pathology as basis for timely cancer diagnosis and therapy.Virchows Archiv : an international journal of pathology · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 8 institutions in 3 countries.

TaeHyung KimDepartment of Computer Science, University of Toronto, Toronto, ON, Canada.
Joon Ho MoonDepartment of Hematology-Oncology, Kyungpook National University Hospital, Daegu, Republic of Korea.
Jae-Sook AhnDepartment of Hematology-Oncology, Chonnam National University Hwasun Hospital, Hwasun, Jeollanam-do, Republic of Korea.
Seo-Yeon AhnDepartment of Hematology-Oncology, Chonnam National University Hwasun Hospital, Hwasun, Jeollanam-do, Republic of Korea.
Sung-Hoon JungDepartment of Hematology-Oncology, Chonnam National University Hwasun Hospital, Hwasun, Jeollanam-do, Republic of Korea.
Deok-Hwan YangDepartment of Hematology-Oncology, Chonnam National University Hwasun Hospital, Hwasun, Jeollanam-do, Republic of Korea.
Je-Jung LeeDepartment of Hematology-Oncology, Chonnam National University Hwasun Hospital, Hwasun, Jeollanam-do, Republic of Korea.
Myung-Geun ShinDepartment of Laboratory Medicine, Chonnam National University Hwasun Hospital, Hwasun, Jeollanam-do, Republic of Korea.
Seung Hyun ChoiGenome Research Center for Hematopoietic Disease, College of Medicine, Chonnam National University Hwasun Hospital, Hwasun-gun, Jeollanam-do, Republic of Korea.
Ja-Yeon LeeGenome Research Center for Hematopoietic Disease, College of Medicine, Chonnam National University Hwasun Hospital, Hwasun-gun, Jeollanam-do, Republic of Korea.
Marc S TyndelThe Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, ON, Canada.
Hui Young LeeDepartment of Internal Medicine, Kangwon National University Hospital, Kangwon National University School of Medicine, Chuncheon, Gangwon-do, Republic of Korea.
Kyoung Ha KimDepartment of Internal Medicine, Soonchunhyang University Hospital, Seoul, Republic of Korea.
Yu CaiDepartment of Hematology, Shanghai General Hospital, Shanghai Jiaotong University, Shanghai, People's Republic of China.
Yoo Jin LeeDepartment of Hematology-Oncology, Kyungpook National University Hospital, Daegu, Republic of Korea.
Sang Kyun SohnDepartment of Hematology-Oncology, Kyungpook National University Hospital, Daegu, Republic of Korea.
Yoo Hong MinDepartment of Internal Medicine, Yonsei University, Seoul, Republic of Korea.
June-Won CheongDepartment of Internal Medicine, Yonsei University, Seoul, Republic of Korea.
Hyeoung-Joon KimDepartment of Hematology-Oncology, Chonnam National University Hwasun Hospital, Hwasun, Jeollanam-do, Republic of Korea. hjoonk@chonnam.ac.kr.
Zhaolei ZhangDepartment of Computer Science, University of Toronto, Toronto, ON, Canada. zhaolei.zhang@utoronto.ca.
Dennis Dong Hwan KimDepartment of Medical Oncology and Hematology, Princess Margaret Cancer Centre, Toronto, ON, Canada. dr.dennis.kim@uhn.ca.
Chonnam National University Hwasun Hospital · KRKyungpook National University Hospital · KRUniversity of Toronto · CAYonsei University · KRKangwon National University Hospital · KRPrincess Margaret Cancer Centre · CAShanghai First People's Hospital · CNSoonchunhyang University Hospital Seoul · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA sequencing-based measurable residual disease (MRD) detection has shown to be clinically relevant in AML. However, the same methodology cannot be applied to fusion gene-driven subtypes of AML such as core-binding factor AML (CBF-AML). Here in this study, we evaluated the effectiveness of using DNA and RNA sequencing in MRD detection and in tracking clonal dynamics in CBF-AML. Using RNA-seq, we were able to quantify expression levels of RUNX1-RUNX1T1 and CBFB-MYH11 at diagnosis and their levels of reduction during remission (P < 6.3e-05 and P < 2.2e-13). The level of reduction of RUNX1-RUNX1T1 as measured by RNA-seq and qPCR were highly correlated (R

Indexed as

MutationAdolescentAdultAgedAged, 80 and overCore Binding Factor Alpha 2 SubunitCore Binding FactorsFemaleGene Expression Regulation, LeukemicGene RearrangementHumansLeukemia, Myeloid, AcuteMaleMiddle AgedMyosin Heavy ChainsNeoplasm, ResidualAML1-ETO fusion protein, humanCore Binding Factor Alpha 2 SubunitCore Binding FactorsMYH11 protein, humanMyosin Heavy ChainsOncogene Proteins, FusionRUNX1T1 protein, humanRUNX1 Translocation Partner 1 Protein

Identifiers

PMID33208771
PMCPMC7674449
OpenAlexW3101644750

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.