Evidence map›Paper›PMID 33208533›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

Structure and regulation of the BsYetJ calcium channel in lipid nanodiscs.

Chieh-Chin Li, Te-Yu Kao, Chu-Chun Cheng, Yun-Wei Chiang

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 22 citations in OpenAlex.

  1. The Nanodisc System for Investigating Protein-Lipid Interactions.Methods in molecular biology (Clifton, N.J.) · 2026
    Review
  2. Structure and Nitrite Reductase Activity of the Di-iron Protein ScdA inJournal of the American Chemical Society · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Chieh-Chin LiDepartment of Chemistry, National Tsing Hua University, 30013 Hsinchu, Taiwan.ORCID 0000-0003-1494-1664
Te-Yu KaoDepartment of Chemistry, National Tsing Hua University, 30013 Hsinchu, Taiwan.ORCID 0000-0002-3286-3287
Chu-Chun ChengDepartment of Chemistry, National Tsing Hua University, 30013 Hsinchu, Taiwan.
Yun-Wei ChiangDepartment of Chemistry, National Tsing Hua University, 30013 Hsinchu, Taiwan ywchiang@gapp.nthu.edu.tw.ORCID 0000-0002-2101-8918
National Tsing Hua University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BsYetJ is a bacterial homolog of transmembrane BAX inhibitor-1 motif-containing 6 (TMBIM6) membrane protein that plays a key role in the control of calcium homeostasis. However, the BsYetJ (or TMBIM6) structure embedded in a lipid bilayer is uncharacterized, let alone the molecular mechanism of the calcium transport activity. Herein, we report structures of BsYetJ in lipid nanodiscs identified by double electron-electron resonance spectroscopy. Our results reveal that BsYetJ in lipid nanodiscs is structurally different from those crystallized in detergents. We show that BsYetJ conformation is pH-sensitive in apo state (lacking calcium), whereas in a calcium-containing solution it is stuck in an intermediate, inert to pH changes. Only when the transmembrane calcium gradient is established can the calcium-release activity of holo-BsYetJ occur and be mediated by pH-dependent conformational changes, suggesting a dual gating mechanism. Conformational substates involved in the process and a key residue D171 relevant to the gating of calcium are identified. Our study suggests that BsYetJ/TMBIM6 is a pH-dependent, voltage-gated calcium channel.

Indexed as

Bacillus subtilisBacterial ProteinsCalciumCalcium ChannelsConserved SequenceHydrogen-Ion ConcentrationLipid BilayersModels, MolecularNanostructuresProtein ConformationReproducibility of ResultsSpin LabelsBacterial ProteinsCalciumCalcium ChannelsLipid BilayersSpin Labelscalcium channelDEER spectroscopymembrane proteinmolecular dynamicsnanodisc

Identifiers

PMID33208533
PMCPMC7720206
OpenAlexW3100994328

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.