Evidence map›Paper›PMID 33208343›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2021

Identification of a Synthetic Lethal Relationship between Nucleotide Excision Repair Deficiency and Irofulven Sensitivity in Urothelial Cancer.

Judit Börcsök, Zsofia Sztupinszki, Raie Bekele, Sizhi P Gao, Miklos Diossy, Amruta S Samant, Kasia M Dillon, Viktoria Tisza, Sándor Spisák, Orsolya Rusz and 20 more

Open access · bronzeAbstract readComment
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
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  9. Genomic Tumor Correlates of Clinical Outcomes Following Organ-Sparing Chemoradiation Therapy for Bladder Cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2023
    Article
  10. Article
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  12. Review
  13. Inherited Germline Cancer Susceptibility Gene Variants in Individuals with Non-Muscle-Invasive Bladder Cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2022
    Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Detection of Molecular Signatures of Homologous Recombination Deficiency in Bladder Cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2021
    Article
  19. Morning for Irofulven, What Could be fiNER?Clinical cancer research : an official journal of the American Association for Cancer Research · 2021
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

30 authors at 14 institutions in 3 countries.

Judit Börcsök *Danish Cancer Society Research Center, Copenhagen, Denmark.ORCID 0000-0002-3290-3971
Zsofia Sztupinszki *Danish Cancer Society Research Center, Copenhagen, Denmark.ORCID 0000-0002-8691-4086
Raie Bekele *Department of Radiation Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Sizhi P Gao *Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, New York.
Miklos DiossyDanish Cancer Society Research Center, Copenhagen, Denmark.ORCID 0000-0003-0308-6615
Amruta S SamantDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Kasia M DillonDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Viktoria TiszaComputational Health Informatics Program, Boston Children's Hospital, Boston, Massachusetts.
Sándor SpisákDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Orsolya Rusz2nd Department of Pathology, SE NAP, Brain Metastasis Research Group, Semmelweis University, Budapest, Hungary.
Istvan CsabaiDepartment of Physics of Complex Systems, Eötvös Loránd University, Budapest, Hungary.ORCID 0000-0001-9232-9898
Helle PappotDepartment of Oncology, Rigshospitalet, University of Copenhagen, Copenhagen, Denmark.ORCID 0000-0002-3570-5372
Zoë J FrazierDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
David J KonieczkowskiDepartment of Radiation Oncology, Arthur G. James Cancer Hospital and Richard J. Solove Research Institute, The Ohio State University, Columbus, Ohio.
David LiuDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.ORCID 0000-0003-0346-5033
Naresh VasaniHuman Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, New York.
James A RodriguesHuman Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, New York.
David B SolitHuman Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, New York.
Jean H Hoffman-CensitsDepartment of Oncology, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University, Baltimore, Maryland.
Elizabeth R PlimackDepartment of Hematology/Oncology, Fox Chase Cancer Center, Philadelphia, Pennsylvania.
Jonathan E RosenbergGenitourinary Oncology Service, Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, New York.
Jean-Bernard LazaroDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Mary-Ellen TaplinDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Gopa IyerGenitourinary Oncology Service, Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, New York.
Søren BrunakNovo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen, Denmark.
Rita LozsaInstitute of Enzymology, Research Centre for Natural Sciences, Budapest, Hungary.
Eliezer M Van AllenDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Dávid SzütsInstitute of Enzymology, Research Centre for Natural Sciences, Budapest, Hungary.
Kent W MouwDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts. zoltan.szallasi@childrens.harvard.edu kent_mouw@dfci.harvard.edu.
Zoltan SzallasiDanish Cancer Society Research Center, Copenhagen, Denmark. zoltan.szallasi@childrens.harvard.edu kent_mouw@dfci.harvard.edu.ORCID 0000-0001-5395-7509
Dana-Farber Cancer Institute · USMemorial Sloan Kettering Cancer Center · USDanish Cancer Society · DKInstitute of Molecular Life Sciences · HUSemmelweis University · HUBoston Children's Hospital · USBoston Medical Center · USBrigham and Women's Hospital · USEötvös Loránd University · HUFox Chase Cancer Center · USNovo Nordisk Foundation · DKSidney Kimmel Comprehensive Cancer Center · USThe Ohio State University Comprehensive Cancer Center – Arthur G. James Cancer Hospital and Richard J. Solove Research Institute · USUniversity of Copenhagen · DK

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
SPORE in Bladder CancerP50CA221745 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI BAJORIN, DEAN F. · 2018 to 2024
$11.8M
Integrative Somatic and Germline Computational Biology to Redefine Clinical Actionability in Solid TumorsR01CA227388 · NCI · DANA-FARBER CANCER INST · PI VAN ALLEN, ELIEZER M · 2018 to 2022
$2.0M
Investigating the effect of ERCC2 mutations on DNA repair capacity and chemo-radiotherapy response in muscle-invasive bladder cancerK08CA219504 · NCI · DANA-FARBER CANCER INST · PI MOUW, KENT W · 2017 to 2021
$885k
NCI NIH HHS K08 CA219504NCI NIH HHS P30 CA008748NCI NIH HHS P50 CA221745NCI NIH HHS R01 CA227388Wellcome Trust
6 · The paper itself

Abstract

purposeCisplatin-based chemotherapy is a first-line treatment for muscle-invasive and metastatic urothelial cancer. Approximately 10% of bladder urothelial tumors have a somatic missense mutation in the nucleotide excision repair (NER) gene, EXPERIMENTAL

designWe used a series of NER-proficient and NER-deficient preclinical tumor models to test sensitivity to irofulven, an abandoned anticancer agent. In addition, we used available clinical and sequencing data from multiple urothelial tumor cohorts to develop and validate a composite mutational signature of

resultsWe identified a novel synthetic lethal relationship between tumor NER deficiency and sensitivity to irofulven. Irofulven specifically targets cells with inactivation of the transcription-coupled NER (TC-NER) pathway and leads to robust responses

conclusionsTumor NER deficiency confers sensitivity to irofulven, a previously abandoned anticancer agent, with minimal activity in NER-proficient cells. A composite mutational signature of NER deficiency may be useful in identifying patients likely to respond to NER-targeting agents, including cisplatin and irofulven.

Indexed as

Antineoplastic AgentsSesquiterpenesUrinary Bladder NeoplasmsCisplatinDNA RepairHumansXeroderma Pigmentosum Group D ProteinAntineoplastic AgentsCisplatinERCC2 protein, humanirofulvenSesquiterpenesXeroderma Pigmentosum Group D Protein

Identifiers

PMID33208343
PMCPMC8026514
OpenAlexW3101711866

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.