Evidence map›Paper›PMID 33207032›Full record

ArticleChembiochem : a European journal of chemical biology2021

Site-Specific Antibody Fragment Conjugates for Reversible Staining in Fluorescence Microscopy.

Jonathan Schwach, Ksenia Kolobynina, Katharina Brandstetter, Marcus Gerlach, Philipp Ochtrop, Jonas Helma, Christian P R Hackenberger, Hartmann Harz, M Cristina Cardoso, Heinrich Leonhardt and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Orthogonal Site-Specific Dual Bioconjugation of Aryl and Alkyl Thiols.Journal of the American Chemical Society · 2025
    Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Jonathan SchwachLudwig-Maximilians-Universität München, Department of Biology II, Human Biology and BioImaging, 82152, Planegg-Martinsried, Germany.
Ksenia KolobyninaTechnical University of Darmstadt, Department of Biology, Cell Biology and Epigenetics, Schnittspahnstr. 10, 64287, Darmstadt, Germany.
Katharina BrandstetterLudwig-Maximilians-Universität München, Department of Biology II, Human Biology and BioImaging, 82152, Planegg-Martinsried, Germany.
Marcus GerlachTubulis GmbH, BioSysM, Butenandtstrasse 1, 81377, Munich, Germany.
Philipp OchtropLeibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP), Department Chemical Biology, Robert-Rössle-Strasse 10, 13125, Berlin, Germany.
Jonas HelmaTubulis GmbH, BioSysM, Butenandtstrasse 1, 81377, Munich, Germany.
Christian P R HackenbergerLeibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP), Department Chemical Biology, Robert-Rössle-Strasse 10, 13125, Berlin, Germany.
Hartmann HarzLudwig-Maximilians-Universität München, Department of Biology II, Human Biology and BioImaging, 82152, Planegg-Martinsried, Germany.
M Cristina CardosoTechnical University of Darmstadt, Department of Biology, Cell Biology and Epigenetics, Schnittspahnstr. 10, 64287, Darmstadt, Germany.
Heinrich LeonhardtLudwig-Maximilians-Universität München, Department of Biology II, Human Biology and BioImaging, 82152, Planegg-Martinsried, Germany.
Andreas StenglLudwig-Maximilians-Universität München, Department of Biology II, Human Biology and BioImaging, 82152, Planegg-Martinsried, Germany.ORCID 0000-0002-8802-3260
Urologische Klinik München · DEMunich Business School · DETechnische Universität Darmstadt · DEHumboldt-Universität zu Berlin · DELeibniz-Forschungsinstitut für Molekulare Pharmakologie · DE

Funding

Deutsche ForschungsgemeinschaftGerman Research Foundation 10-2German Research Foundation 13-2German Research Foundation 198/8-1German Research Foundation 4468/9-1German Research Foundation 721/13-1German Research Foundation 8-2German Research Foundation 9-2German Research Foundation GRK1657/TP1BGerman Research Foundation GRK1721German Research Foundation SPP1623Leibniz AssociationLeibniz Wettbewerb T18/2017Tub-tag® technology
6 · The paper itself

Abstract

Antibody conjugates have taken a great leap forward as tools in basic and applied molecular life sciences that was enabled by the development of chemoselective reactions for the site-specific modification of proteins. Antibody-oligonucleotide conjugates combine the antibody's target specificity with the reversible, sequence-encoded binding properties of oligonucleotides like DNAs or peptide nucleic acids (PNAs), allowing sequential imaging of large numbers of targets in a single specimen. In this report, we use the Tub-tag® technology in combination with Cu-catalyzed azide-alkyne cycloaddition for the site-specific conjugation of single DNA and PNA strands to an eGFP-binding nanobody. We show binding of the conjugate to recombinant eGFP and subsequent sequence-specific annealing of fluorescently labelled imager strands. Furthermore, we reversibly stain eGFP-tagged proteins in human cells, thus demonstrating the suitability of our conjugation strategy to generate antibody-oligonucleotides for reversible immunofluorescence imaging.

Indexed as

Microscopy, FluorescenceAlkynesAzidesCatalysisCell LineCopperCycloaddition ReactionDNAGreen Fluorescent ProteinsHumansImmunoconjugatesImmunoglobulin FragmentsPeptide Nucleic AcidsSingle-Domain AntibodiesAlkynesAzidesCopperDNAenhanced green fluorescent proteinGreen Fluorescent ProteinsImmunoconjugatesImmunoglobulin FragmentsPeptide Nucleic AcidsSingle-Domain Antibodiesantibody conjugatesimmunofluorescence stainingnanobodiespeptide nucleic acidssuper-resolution microscopyTub-tag labelling

Identifiers

PMID33207032
PMCPMC8048457
OpenAlexW3103226397

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.