Evidence map›Paper›PMID 33205130›Full record

ArticlePatterns (New York, N.Y.)2020

The Veterans Affairs Precision Oncology Data Repository, a Clinical, Genomic, and Imaging Research Database.

Danne C Elbers, Nathanael R Fillmore, Feng-Chi Sung, Spyridon S Ganas, Andrew Prokhorenkov, Christopher Meyer, Robert B Hall, Samuel J Ajjarapu, Daniel C Chen, Frank Meng and 3 more

Abstract read
In one paragraph

Article in Patterns (New York, N.Y.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Influential Usage of Big Data and Artificial Intelligence in Healthcare.Computational and mathematical methods in medicine · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Danne C ElbersVA Cooperative Studies Program, VA Boston Healthcare System (151MAV), 150 S. Huntington Ave, Jamaica Plain, MA 02130, USA.
Nathanael R FillmoreVA Cooperative Studies Program, VA Boston Healthcare System (151MAV), 150 S. Huntington Ave, Jamaica Plain, MA 02130, USA.
Feng-Chi SungVA Cooperative Studies Program, VA Boston Healthcare System (151MAV), 150 S. Huntington Ave, Jamaica Plain, MA 02130, USA.
Spyridon S GanasVA Cooperative Studies Program, VA Boston Healthcare System (151MAV), 150 S. Huntington Ave, Jamaica Plain, MA 02130, USA.
Andrew ProkhorenkovUniversity of Chicago, Center for Data Intensive Science, Chicago, IL 60615, USA.
Christopher MeyerUniversity of Chicago, Center for Data Intensive Science, Chicago, IL 60615, USA.
Robert B HallVA Cooperative Studies Program, VA Boston Healthcare System (151MAV), 150 S. Huntington Ave, Jamaica Plain, MA 02130, USA.
Samuel J AjjarapuVA Cooperative Studies Program, VA Boston Healthcare System (151MAV), 150 S. Huntington Ave, Jamaica Plain, MA 02130, USA.
Daniel C ChenVA Cooperative Studies Program, VA Boston Healthcare System (151MAV), 150 S. Huntington Ave, Jamaica Plain, MA 02130, USA.
Frank MengVA Cooperative Studies Program, VA Boston Healthcare System (151MAV), 150 S. Huntington Ave, Jamaica Plain, MA 02130, USA.
Robert L GrossmanUniversity of Chicago, Center for Data Intensive Science, Chicago, IL 60615, USA.
Mary T BrophyVA Cooperative Studies Program, VA Boston Healthcare System (151MAV), 150 S. Huntington Ave, Jamaica Plain, MA 02130, USA.
Nhan V DoVA Cooperative Studies Program, VA Boston Healthcare System (151MAV), 150 S. Huntington Ave, Jamaica Plain, MA 02130, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Veterans Affairs Precision Oncology Data Repository (VA-PODR) is a large, nationwide repository of de-identified data on patients diagnosed with cancer at the Department of Veterans Affairs (VA). Data include longitudinal clinical data from the VA's nationwide electronic health record system and the VA Central Cancer Registry, targeted tumor sequencing data, and medical imaging data including computed tomography (CT) scans and pathology slides. A subset of the repository is available at the Genomic Data Commons (GDC) and The Cancer Imaging Archive (TCIA), and the full repository is available through the Veterans Precision Oncology Data Commons (VPODC). By releasing this de-identified dataset, we aim to advance Veterans' health care through enabling translational research on the Veteran population by a wide variety of researchers.

Indexed as

data commonsdata integrationdata sharingde-identificationgenomic datahealthcareoutcomes researchprecision oncologysecondary use of clinical datatranslational research

Identifiers

PMID33205130
PMCPMC7660389

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.