Evidence map›Paper›PMID 33205061›Full record

ArticleCell reports. Medicine2020

Human Tumor-Infiltrating MAIT Cells Display Hallmarks of Bacterial Antigen Recognition in Colorectal Cancer.

Shamin Li, Yannick Simoni, Etienne Becht, Chiew Yee Loh, Naisi Li, Daniel Lachance, Si-Lin Koo, Teck Por Lim, Emile Kwong Wei Tan, Ronnie Mathew and 11 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports. Medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed, 2 pooled it
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 2 syntheses or guidelines pooled it, 57 citations in OpenAlex.

  1. Pooled it
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  18. Association ofGut microbiome (Cambridge, England) · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 6 institutions in 2 countries.

Shamin LiVaccine and Infectious Diseases Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Yannick SimoniVaccine and Infectious Diseases Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Etienne BechtVaccine and Infectious Diseases Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Chiew Yee LohAgency for Science, Technology and Research (A∗STAR), Singapore Immunology Network (SIgN), Singapore, Singapore.
Naisi LiClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Daniel LachanceClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Si-Lin KooDivision of Medical Oncology, National Cancer Centre Singapore (NCCS), Singapore, Singapore.
Teck Por LimComputational and Systems Biology, Genome Institute of Singapore, Singapore, Singapore.
Emile Kwong Wei TanDepartment of Colorectal Surgery, Singapore General Hospital, Singapore, Singapore.
Ronnie MathewDepartment of Colorectal Surgery, Singapore General Hospital, Singapore, Singapore.
Andrew NguyenNantOmics, Santa Cruz, CA, USA.
Justin GolovatoNantOmics, Santa Cruz, CA, USA.
Julia D BerksonVaccine and Infectious Diseases Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Martin PrlicVaccine and Infectious Diseases Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Bernett LeeAgency for Science, Technology and Research (A∗STAR), Singapore Immunology Network (SIgN), Singapore, Singapore.
Samuel S MinotMicrobiome Research Initiative, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Niranjan NagarajanComputational and Systems Biology, Genome Institute of Singapore, Singapore, Singapore.
Neelendu DeyClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Daniel S W TanDivision of Medical Oncology, National Cancer Centre Singapore (NCCS), Singapore, Singapore.
Iain B TanDivision of Medical Oncology, National Cancer Centre Singapore (NCCS), Singapore, Singapore.
Evan W NewellVaccine and Infectious Diseases Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Fred Hutch Cancer Center · USNational Cancer Centre Singapore · SGAgency for Science, Technology and Research · SGSingapore General Hospital · SGGenome Institute of Singapore · SGNational University of Singapore · SG

Funding

TRAINING IN MOLECULAR AND CELLULAR BIOLOGYT32GM007270 · NIGMS · UNIVERSITY OF WASHINGTON · PI RAIBLE, DAVID W · 1985 to 2020
$21.0M
Inflammation-driven T Cell Responses and their Dichotomous Effect on Host ImmunityR01AI123323 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI PRLIC, MARTIN · 2017 to 2025
$5.0M
NIAID NIH HHS R01 AI123323NIGMS NIH HHS T32 GM007270
6 · The paper itself

Abstract

Growing evidence indicates a role for the gut microbiota in modulating anti-tumor treatment efficacy in human cancer. Here we study mucosa-associated invariant T (MAIT) cells to look for evidence of bacterial antigen recognition in human colon, lung, and kidney carcinomas. Using mass cytometry and single-cell mRNA sequencing, we identify a tumor-infiltrating MAIT cell subset expressing CD4 and Foxp3 and observe high expression of CD39 on MAIT cells from colorectal cancer (CRC) only, which we show

Indexed as

Antigens, BacterialAntigens, CDApyraseCD4 AntigensCell Line, TumorColorectal NeoplasmsForkhead Transcription FactorsGastrointestinal MicrobiomeHumansLymphocyte ActivationMucosal-Associated Invariant T CellsReceptors, Antigen, T-CellAntigens, BacterialAntigens, CDApyraseCD39 antigenCD4 AntigensForkhead Transcription FactorsReceptors, Antigen, T-CellCD39colorectal cancerCyTOFMAITmicrobiome

Identifiers

PMID33205061
PMCPMC7659584
OpenAlexW3037690340

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.