Evidence map›Paper›PMID 33204934›Full record

ArticlePlant direct2020

Metabolic changes in the developing sugarcane culm associated with high yield and early high sugar content.

Virginie Perlo, Frederik C Botha, Agnelo Furtado, Katrina Hodgson-Kratky, Robert J Henry

Abstract read
In one paragraph

Article in Plant direct, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Transcriptome changes in the developing sugarcane culm associated with high yield and early-season high sugar content.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Virginie PerloQueensland Alliance for Agriculture and Food Innovation University of Queensland Brisbane QLD Australia.ORCID https://orcid.org/0000-0001-8429-877X
Frederik C BothaQueensland Alliance for Agriculture and Food Innovation University of Queensland Brisbane QLD Australia.
Agnelo FurtadoQueensland Alliance for Agriculture and Food Innovation University of Queensland Brisbane QLD Australia.
Katrina Hodgson-KratkyQueensland Alliance for Agriculture and Food Innovation University of Queensland Brisbane QLD Australia.
Robert J HenryQueensland Alliance for Agriculture and Food Innovation University of Queensland Brisbane QLD Australia.ORCID https://orcid.org/0000-0002-4060-0292

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sugarcane, with its exceptional biomass and sugar yield, has a high potential for the production of bioenergy, biomaterials, and high-value products. Currently, the link between metabolic changes in the developing internodes in sugarcane and final yield and sugar characteristics is not well understood. In order to investigate these correlations, 1,440 internodes were collected and combined to generate a set of 360 samples across 24 sugarcane cultivars at five different developmental stages. A combination of metabolome profiling and trait co-expression analyses were conducted to reveal the interaction between the metabolome and essential agronomic traits, including Brix (total sugar), polarity (sucrose content), purity (sucrose purity), commercially extractable sucrose, fiber, and tons of cane per hectare (TCH). Metabolomic analysis revealed significant differences in metabolic patterns mainly correlated with developmental stage. Hierarchical clustering of genotypes and traits revealed clear partitioning of groups of early-, mid- and late-season sugar content, with secondary segregation by the yield trait, TCH, and fiber content. The study identified co-expression and specific metabolites associated with metabolic pathways correlated with Brix and fiber content. Knowledge of the correlation between co-expressed metabolites and diverse agronomic traits will allow more deliberate selection of genotypes for early or late sugar development and fiber content and biomass yield.

Indexed as

developmentfibermetabolomeSaccharumsugarsugarcane

Identifiers

PMID33204934
PMCPMC7656173

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.