Evidence map›Paper›PMID 33202695›Full record

ArticleMarine drugs2020

Microbial Diversity and Phage-Host Interactions in the Georgian Coastal Area of the Black Sea Revealed by Whole Genome Metagenomic Sequencing.

Ekaterine Jaiani, Ia Kusradze, Tamar Kokashvili, Natia Geliashvili, Nino Janelidze, Adam Kotorashvili, Nato Kotaria, Archil Guchmanidze, Marina Tediashvili, David Prangishvili

Open access · goldAbstract read
In one paragraph

Article in Marine drugs, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
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  4. Genome sequences of the firstMicrobial genomics · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Ekaterine JaianiG. Eliava Institute of Bacteriophages, Microbiology and Virology, Tbilisi 0160, Georgia.ORCID 0000-0001-5811-9694
Ia KusradzeG. Eliava Institute of Bacteriophages, Microbiology and Virology, Tbilisi 0160, Georgia.ORCID 0000-0003-4524-436X
Tamar KokashviliG. Eliava Institute of Bacteriophages, Microbiology and Virology, Tbilisi 0160, Georgia.
Natia GeliashviliG. Eliava Institute of Bacteriophages, Microbiology and Virology, Tbilisi 0160, Georgia.
Nino JanelidzeG. Eliava Institute of Bacteriophages, Microbiology and Virology, Tbilisi 0160, Georgia.
Adam KotorashviliRichard Lugar Center for Public Health Research, National Center for Disease Control and Public Health, Tbilisi 0198, Georgia.
Nato KotariaRichard Lugar Center for Public Health Research, National Center for Disease Control and Public Health, Tbilisi 0198, Georgia.
Archil GuchmanidzeAssociation "Flora and Fauna", Batumi 6010, Georgia.
Marina TediashviliG. Eliava Institute of Bacteriophages, Microbiology and Virology, Tbilisi 0160, Georgia.
David PrangishviliPasteur Institute, 75015 Paris, France.
George Eliava Institute of Bacteriophage, Microbiology and Virology · GENational Center for Disease Control and Public Health · GEFauna and Flora International · GBTbilisi State University · GE

Funding

Shota Rustaveli National Science Foundation FR 17-442
6 · The paper itself

Abstract

Viruses have the greatest abundance and highest genetic diversity in marine ecosystems. The interactions between viruses and their hosts is one of the hot spots of marine ecology. Besides their important role in various ecosystems, viruses, especially bacteriophages and their gene pool, are of enormous interest for the development of new gene products with high innovation value. Various studies have been conducted in diverse ecosystems to understand microbial diversity and phage-host interactions; however, the Black Sea, especially the Eastern coastal area, remains among the least studied ecosystems in this regard. This study was aimed at to fill this gap by analyzing microbial diversity and bacteriophage-host interactions in the waters of Eastern Black Sea using a metagenomic approach. To this end, prokaryotic and viral metagenomic DNA from two sampling sites, Poti and Gonio, were sequenced on the Illumina Miseq platform and taxonomic and functional profiles of the metagenomes were obtained using various bioinformatics tools. Our metagenomics analyses allowed us to identify the microbial communities, with

Indexed as

Genome, BacterialGenome, ViralMetagenomeMetagenomicsWhole Genome SequencingBacteriaBacteriophagesBlack SeaDNA, BacterialDNA, ViralEcosystemHost-Pathogen InteractionsMicrobiotaWater MicrobiologyDNA, BacterialDNA, Viralmetagenomicsmicrobial diversityphage–host interactionsthe Black Sea

Identifiers

PMID33202695
PMCPMC7697616
OpenAlexW3099936036

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.