Evidence map›Paper›PMID 33200842›Full record

ArticleBioEssays : news and reviews in molecular, cellular and developmental biology2021

The genetic structure of SARS-CoV-2 does not rule out a laboratory origin: SARS-COV-2 chimeric structure and furin cleavage site might be the result of genetic manipulation.

Rossana Segreto, Yuri Deigin

Open access · hybridAbstract read
In one paragraph

Article in BioEssays : news and reviews in molecular, cellular and developmental biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 2 pooled it
2.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 2 syntheses or guidelines pooled it, 116 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Trial
  4. Review
  5. Will COVID-19 become mild, like a cold?Epidemiology and infection · 2024
    Review
  6. Selective IgA Deficiency May Be an Underrecognized Risk Factor for Severe COVID-19.The journal of allergy and clinical immunology. In practice · 2023
    Article
  7. Article
  8. SARS-CoV-2 in brief: from virus to prevention.Osong public health and research perspectives · 2022
    Article
  9. Review
  10. The origins of COVID-19 pandemic: A brief overview.Transboundary and emerging diseases · 2022
    Review
  11. Article
  12. Article
  13. There is no "origin" to SARS-CoV-2.Environmental research · 2022
    Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

Rossana SegretoDepartment of Microbiology, University of Innsbruck, Innsbruck, Austria.ORCID 0000-0002-2566-7042
Yuri DeiginYouthereum Genetics Inc., Toronto, Ontario, Canada.
Ontario Centre of Excellence for Child and Youth Mental Health · CAUniversität Innsbruck · AT

Funding

Understanding the Risk of Bat Coronavirus EmergenceR01AI110964 · NIAID · ECOHEALTH ALLIANCE, INC. · PI DASZAK, PETER · 2014 to 2023
$4.3M
NIAID NIH HHS R01 AI110964
6 · The paper itself

Abstract

Severe acute respiratory syndrome-coronavirus (SARS-CoV)-2's origin is still controversial. Genomic analyses show SARS-CoV-2 likely to be chimeric, most of its sequence closest to bat CoV RaTG13, whereas its receptor binding domain (RBD) is almost identical to that of a pangolin CoV. Chimeric viruses can arise via natural recombination or human intervention. The furin cleavage site in the spike protein of SARS-CoV-2 confers to the virus the ability to cross species and tissue barriers, but was previously unseen in other SARS-like CoVs. Might genetic manipulations have been performed in order to evaluate pangolins as possible intermediate hosts for bat-derived CoVs that were originally unable to bind to human receptors? Both cleavage site and specific RBD could result from site-directed mutagenesis, a procedure that does not leave a trace. Considering the devastating impact of SARS-CoV-2 and importance of preventing future pandemics, researchers have a responsibility to carry out a thorough analysis of all possible SARS-CoV-2 origins.

Indexed as

Angiotensin-Converting Enzyme 2AnimalsBase SequenceChinaChiropteraCOVID-19EutheriaFurinGenetic EngineeringHumansMutagenesis, Site-DirectedProtein BindingReassortant VirusesReceptors, VirusSARS-CoV-2Sequence AlignmentACE2 protein, humanAngiotensin-Converting Enzyme 2FurinFURIN protein, humanReceptors, VirusSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2BtCov/4991furin cleavage siteGain-of-function studiespangolin CoVRaTG13receptor binding domainSARS-CoV-2

Identifiers

PMID33200842
PMCPMC7744920
OpenAlexW3103466171

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.