Evidence map›Paper›PMID 33198745›Full record

ArticleBMC biology2020

Protein kinase A controls yeast growth in visible light.

Mikael Molin, Katarina Logg, Kristofer Bodvard, Ken Peeters, Annabelle Forsmark, Friederike Roger, Anna Jörhov, Neha Mishra, Jean-Marc Billod, Sabiha Amir and 5 more

Open access · goldAbstract read
In one paragraph

Article in BMC biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Light Stress in Yeasts: Signaling and Responses in Creatures of the Night.International journal of molecular sciences · 2023
    Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Effect of Light andFrontiers in microbiology · 2021
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 3 countries.

Mikael MolinDepartment of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden. mikael.molin@chalmers.se.ORCID 0000-0002-3903-8503
Katarina LoggDepartment of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden.
Kristofer BodvardDepartment of Physics, Chalmers University of Technology, Gothenburg, Sweden.
Ken PeetersDepartment of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden.
Annabelle ForsmarkDepartment of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden.
Friederike RogerDepartment of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden.
Anna JörhovDepartment of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden.
Neha MishraDepartment of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden.
Jean-Marc BillodDepartment of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden.
Sabiha AmirDepartment of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden.
Mikael AnderssonDepartment of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden.
Leif A ErikssonDepartment of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden.
Jonas WarringerDepartment of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden.
Mikael KällDepartment of Physics, Chalmers University of Technology, Gothenburg, Sweden.
Anders BlombergDepartment of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden. anders.blomberg@cmb.gu.se.ORCID 0000-0002-1260-3920
University of Gothenburg · SEChalmers University of Technology · SEBiofokus · NOHorizon Discovery (United Kingdom) · GB

Funding

Cancerfonden 2017-778Vetenskapsrådet 2011-5170Vetenskapsrådet 2014-3914Vetenskapsrådet 621-2007-5421
6 · The paper itself

Abstract

backgroundA wide variety of photosynthetic and non-photosynthetic species sense and respond to light, having developed protective mechanisms to adapt to damaging effects on DNA and proteins. While the biology of UV light-induced damage has been well studied, cellular responses to stress from visible light (400-700 nm) remain poorly understood despite being a regular part of the life cycle of many organisms. Here, we developed a high-throughput method for measuring growth under visible light stress and used it to screen for light sensitivity in the yeast gene deletion collection.

resultsWe found genes involved in HOG pathway signaling, RNA polymerase II transcription, translation, diphthamide modifications of the translational elongation factor eEF2, and the oxidative stress response to be required for light resistance. Reduced nuclear localization of the transcription factor Msn2 and lower glycogen accumulation indicated higher protein kinase A (cAMP-dependent protein kinase, PKA) activity in many light-sensitive gene deletion strains. We therefore used an ectopic fluorescent PKA reporter and mutants with constitutively altered PKA activity to show that repression of PKA is essential for resistance to visible light.

conclusionWe conclude that yeast photobiology is multifaceted and that protein kinase A plays a key role in the ability of cells to grow upon visible light exposure. We propose that visible light impacts on the biology and evolution of many non-photosynthetic organisms and have practical implications for how organisms are studied in the laboratory, with or without illumination.

Indexed as

Cyclic AMP-Dependent Protein KinasesLightSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSignal TransductionCyclic AMP-Dependent Protein KinasesSaccharomyces cerevisiae ProteinsDiphthamide modificationGenome-wide screenHOG signalingLight sensitivityProtein kinase AVisible lightYeast

Identifiers

PMID33198745
PMCPMC7667738
OpenAlexW3100441760

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.