Evidence map›Paper›PMID 33198624›Full record

ArticleBMC genetics2020

Functional identification of PsMYB57 involved in anthocyanin regulation of tree peony.

Yanzhao Zhang, Shuzhen Xu, Yanwei Cheng, Jing Wang, Xiangxiang Wang, Runxiao Liu, Jianming Han

Open access · diamondAbstract read
In one paragraph

Article in BMC genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 32 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Yanzhao ZhangLife Science Department, Luoyang Normal University, Luoyang, 471022, China. yzhao_zhang@163.com.ORCID 0000-0002-2346-4022
Shuzhen XuLife Science Department, Luoyang Normal University, Luoyang, 471022, China.
Yanwei ChengLife Science Department, Luoyang Normal University, Luoyang, 471022, China.
Jing WangLife Science Department, Luoyang Normal University, Luoyang, 471022, China.
Xiangxiang WangLife Science Department, Luoyang Normal University, Luoyang, 471022, China.
Runxiao LiuLife Science Department, Luoyang Normal University, Luoyang, 471022, China.
Jianming HanLife Science Department, Luoyang Normal University, Luoyang, 471022, China.
Luoyang Normal University · CN

Funding

Applied Science and Technology Research Fund of Luoyang Normal University 2015-YYJJ-003Henan Province Science and Technology Breakthrough Project 172102310054National Natural Science Foundation of China 31400602
6 · The paper itself

Abstract

backgroundR2R3 myeloblastosis (MYB) genes are widely distributed in plants and comprise one of the largest transcription factor gene families. They play important roles in the regulatory networks controlling development, metabolism, and stress responses. Researches on functional genes in tree peony are still in its infancy. To date, few MYB genes have thus far been reported.

resultsIn this study, we constructed a comprehensive reference gene set by transcriptome sequencing to obtain R2R3 MYB genes. The transcriptomes of eight different tissues were sequenced, and 92,837 unigenes were obtained with an N50 of 1662 nt. A total of 48,435 unigenes (77.98%) were functionally annotated in public databases. Based on the assembly, we identified 57 R2R3 MYB genes containing full-length open reading frames, which clustered into 35 clades by phylogenetic analysis. PsMYB57 clustered with anthocyanin regulation genes in Arabidopsis and was mainly transcribed in the buds and young leaves. The overexpression of PsMYB57 induced anthocyanin accumulation in tobacco, and four detected anthocyanin structural genes, including NtCHS, NtF3'H, NtDFR, and NtANS, were upregulated. The two endogenous bHLH genes NtAn1a and NtAn1b were also upregulated and may work in combination with PsMYB57 in regulating anthocyanin structural genes.

conclusionsOur study offers a useful reference to the selection of candidate MYB genes for further functional studies in tree peony. Function analysis of PsMYB57 is helpful to understand the color accumulation in vegetative organs of tree peony. PsMYB57 is also a promising resource to improve plant color in molecular breeding.

Indexed as

Gene Expression Regulation, PlantAnthocyaninsArabidopsisGenes, PlantMultigene FamilyNicotianaPaeoniaPhylogenyPlant ProteinsPlants, Genetically ModifiedTranscription FactorsTranscriptomeAnthocyaninsPlant ProteinsTranscription FactorsAnthocyaninMYB gene familyPsMYB57TranscriptomeTree peony

Identifiers

PMID33198624
PMCPMC7667756
OpenAlexW3098980078

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.