Evidence map›Paper›PMID 33196316›Full record

ArticleAmerican journal of respiratory cell and molecular biology2021

Flow-Cytometric Analysis and Purification of Airway Epithelial-Cell Subsets.

Luke R Bonser, Kyung Duk Koh, Kristina Johansson, Semil P Choksi, Dan Cheng, Leqian Liu, Dingyuan I Sun, Lorna T Zlock, Walter L Eckalbar, Walter E Finkbeiner and 1 more

Open access · greenAbstract read
In one paragraph

Article in American journal of respiratory cell and molecular biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 63 citations in OpenAlex.

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  13. The different response of PMRespiratory research · 2025
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  15. A novelThe European respiratory journal · 2024
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  17. Magnetoactive,Cellular and molecular bioengineering · 2024
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  18. Article
  19. Tropism for ciliated cells is the dominant driver of influenza viral burst size in the human airway.Proceedings of the National Academy of Sciences of the United States of America · 2024
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 3 countries.

Luke R BonserLung Biology Center.ORCID 0000-0001-9942-5567
Kyung Duk KohLung Biology Center.ORCID 0000-0003-3326-8217
Kristina JohanssonDepartment of Microbiology and Immunology.
Semil P ChoksiCardiovascular Research Institute.
Dan ChengLung Biology Center.
Leqian LiuDepartment of Bioengineering and Therapeutic Sciences.
Dingyuan I SunDepartment of Pathology, and.
Lorna T ZlockDepartment of Pathology, and.
Walter L EckalbarLung Biology Center.
Walter E FinkbeinerDepartment of Pathology, and.
David J ErleLung Biology Center.ORCID 0000-0002-2171-0648
Cardiovascular Institute Hospital · JPUniversity of California, San Francisco · USSanden (Japan) · JP

Funding

Understanding Asthma EndotypesU19AI077439 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI PRESCOTT G WOODRUFF · 2008 to 2026
$41.1M
SynthesisP30DK072517 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI VERKMAN, ALAN S · 2005 to 2022
$18.1M
Airway epithelial cell gene regulation: new mechanisms and therapeutic strategiesR35HL145235 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ERLE, DAVID J · 2019 to 2025
$6.8M
Airway Epithelial Reprogramming in AsthmaR01HL138424 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ERLE, DAVID J · 2017 to 2018
$1.3M
NHLBI NIH HHS R01 HL138424NHLBI NIH HHS R35 HL145235NIAID NIH HHS U19 AI077439NIDDK NIH HHS P30 DK072517
6 · The paper itself

Abstract

The human airway epithelium is essential in homeostasis, and epithelial dysfunction contributes to chronic airway disease. Development of flow-cytometric methods to characterize subsets of airway epithelial cells will enable further dissection of airway epithelial biology. Leveraging single-cell RNA-sequencing data in combination with known cell type-specific markers, we developed panels of antibodies to characterize and isolate the major airway epithelial subsets (basal, ciliated, and secretory cells) from human bronchial epithelial-cell cultures. We also identified molecularly distinct subpopulations of secretory cells and demonstrated cell subset-specific expression of low-abundance transcripts and microRNAs that are challenging to analyze with current single-cell RNA-sequencing methods. These new tools will be valuable for analyzing and separating airway epithelial subsets and interrogating airway epithelial biology.

Indexed as

AntibodiesBiomarkersCell SeparationEpithelial CellsFlow CytometryHumansRespiratory SystemAntibodiesBiomarkersairway epitheliumflow cytometrysingle-cell RNA sequencing

Identifiers

PMID33196316
PMCPMC7909335
OpenAlexW3101507261

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.