Evidence map›Paper›PMID 33193686›Full record

ArticleFrontiers in genetics2020

Plant-Based Diets Induce Transcriptomic Changes in Muscle of Zebrafish and Atlantic Salmon.

Anusha K S Dhanasiri, Amritha Johny, Xi Xue, Gerd M Berge, Andre S Bogevik, Matthew L Rise, Christiane K Fæste, Jorge M O Fernandes

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
1.5field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 16 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Possible Dietary Effects of Insect-Based Diets across Zebrafish (Animals : an open access journal from MDPI · 2021
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Anusha K S DhanasiriFaculty of Biosciences and Aquaculture, Nord University, Bodø, Norway.
Amritha JohnyToxinology Research Group, Norwegian Veterinary Institute, Oslo, Norway.
Xi XueDepartment of Ocean Sciences, Memorial University of Newfoundland, St. John's, NL, Canada.
Gerd M BergeNorwegian Institute of Food, Fisheries and Aquaculture Research (Nofima), Sunndalsøra, Norway.
Andre S BogevikNorwegian Institute of Food, Fisheries and Aquaculture Research (Nofima), Fyllingsdalen, Norway.
Matthew L RiseDepartment of Ocean Sciences, Memorial University of Newfoundland, St. John's, NL, Canada.
Christiane K FæsteToxinology Research Group, Norwegian Veterinary Institute, Oslo, Norway.
Jorge M O FernandesFaculty of Biosciences and Aquaculture, Nord University, Bodø, Norway.
Memorial University of Newfoundland · CANofima · NONord University · NONorwegian Veterinary Institute · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

With the expansion of the aquaculture industry in the last two decades, there has been a large increase in the use of plant ingredients in aquafeeds, which has created new challenges in fish growth, health and welfare. Fish muscle growth is an important trait that is strongly affected by diet, but our knowledge on the effect of plant protein-based diets on global gene expression in muscle is still scant. The present study evaluated nutrigenomic effects of the inclusion of proteins from pea, soy and wheat into aquafeeds, compared to a control diet with fishmeal as the main protein source using the zebrafish model by RNA-seq; these results were extended to an important aquaculture species by analyzing selected differentially expressed genes identified in the zebrafish model on on-growing Atlantic salmon fed with equivalent plant protein-based diets. Expression of selected Atlantic salmon paralogues of the zebrafish homologs was analyzed using paralogue-specific qPCR assays. Global gene expression changes in muscle of zebrafish fed with plant-based diets were moderate, with the highest changes observed in the soy diet-fed fish, and no change for the pea diet-fed fish compared to the control diet. Among the differentially expressed genes were

Indexed as

fast musclegene expressionpea protein concentrateplant-based proteinssoy protein concentratewheat gluten

Identifiers

PMID33193686
PMCPMC7642599
OpenAlexW3093703237

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.