Evidence map›Paper›PMID 33193569›Full record

ArticleFrontiers in genetics2020

A Pilot Study on the Whole Exome Sequencing of Prostate Cancer in the Indian Phenotype Reveals Distinct Polymorphisms.

Ayam Gupta, Nidhi Shukla, Mamta Nehra, Sonal Gupta, Babita Malik, Ashwani Kumar Mishra, Maneesh Vijay, Jyotsna Batra, Nirmal Kumar Lohiya, Devendra Sharma and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.5field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Ayam GuptaDepartment of Biotechnology and Bioinformatics, Birla Institute of Scientific Research, Jaipur, India.
Nidhi ShuklaDepartment of Biotechnology and Bioinformatics, Birla Institute of Scientific Research, Jaipur, India.
Mamta NehraDepartment of Biotechnology and Bioinformatics, Birla Institute of Scientific Research, Jaipur, India.
Sonal GuptaDepartment of Biotechnology and Bioinformatics, Birla Institute of Scientific Research, Jaipur, India.
Babita MalikDepartment of Chemistry, School of Basic Sciences, Manipal University Jaipur, Jaipur, India.
Ashwani Kumar MishraDNA Xperts Private Limited, Noida, India.
Maneesh VijayRukmani Birla Hospitals, Jaipur, India.
Jyotsna BatraAustralian Prostate Cancer Research Centre, Queensland Institute of Health and Biomedical Innovation and School of Biomedical Science, Queensland University of Technology, Brisbane, QLD, Australia.
Nirmal Kumar LohiyaDepartment of Zoology, University of Rajasthan, Jaipur, India.
Devendra SharmaRukmani Birla Hospitals, Jaipur, India.
Prashanth SuravajhalaDepartment of Biotechnology and Bioinformatics, Birla Institute of Scientific Research, Jaipur, India.
Birla Institute of Scientific Research · INSujata Birla Hospital and Medical Research Center · INManipal University JaipurQueensland University of Technology · AUUniversity of Rajasthan · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Prostate cancer (PCa) is the third most common cancer among men in India, and no next-generation sequencing (NGS) studies have been attempted earlier. Recent advances in NGS have heralded the discovery of biomarkers from Caucasian/European and Chinese ancestry, but not much is known about the Indian phenotype/variant of PCa. In a pilot study using the whole exome sequencing of benign/PCa patients, we identified characteristic mutations specific to the Indian sub-population. We observed a large number of mutations in DNA repair genes,

Indexed as

biomarkersexome sequencinggenomicsprognosisprostate cancer

Identifiers

PMID33193569
PMCPMC7477354
OpenAlexW3081155098

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.