Evidence map›Paper›PMID 33193550›Full record

ArticleFrontiers in plant science2020

MaizeMine: A Data Mining Warehouse for the Maize Genetics and Genomics Database.

Md Shamimuzzaman, Jack M Gardiner, Amy T Walsh, Deborah A Triant, Justin J Le Tourneau, Aditi Tayal, Deepak R Unni, Hung N Nguyen, John L Portwood, Ethalinda K S Cannon and 2 more

Abstract read
In one paragraph

Article in Frontiers in plant science, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. PlantCHRs: A comprehensive database of plant chromatin remodeling factors.Computational and structural biotechnology journal · 2023
    Article
  10. Review
  11. HumanMine: advanced data searching, analysis and cross-species comparison.Database : the journal of biological databases and curation · 2022
    Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Md ShamimuzzamanDivision of Animal Sciences, University of Missouri, Columbia, MO, United States.
Jack M GardinerDivision of Animal Sciences, University of Missouri, Columbia, MO, United States.
Amy T WalshDivision of Animal Sciences, University of Missouri, Columbia, MO, United States.
Deborah A TriantDivision of Animal Sciences, University of Missouri, Columbia, MO, United States.
Justin J Le TourneauDivision of Animal Sciences, University of Missouri, Columbia, MO, United States.
Aditi TayalDivision of Animal Sciences, University of Missouri, Columbia, MO, United States.
Deepak R UnniDivision of Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA, United States.
Hung N NguyenDivision of Animal Sciences, University of Missouri, Columbia, MO, United States.
John L PortwoodUSDA-ARS Corn Insects and Crop Genetics Research Unit, Iowa State University, Ames, IA, United States.
Ethalinda K S CannonUSDA-ARS Corn Insects and Crop Genetics Research Unit, Iowa State University, Ames, IA, United States.
Carson M AndorfUSDA-ARS Corn Insects and Crop Genetics Research Unit, Iowa State University, Ames, IA, United States.
Christine G ElsikDivision of Animal Sciences, University of Missouri, Columbia, MO, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MaizeMine is the data mining resource of the Maize Genetics and Genome Database (MaizeGDB; http://maizemine.maizegdb.org). It enables researchers to create and export customized annotation datasets that can be merged with their own research data for use in downstream analyses. MaizeMine uses the InterMine data warehousing system to integrate genomic sequences and gene annotations from the

Indexed as

data mininggenome databaseInterMinemaizeZea mays

Identifiers

PMID33193550
PMCPMC7642280

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.