Evidence map›Paper›PMID 33193468›Full record

ArticleFrontiers in plant science2020

Extended Set of GoldenBraid Compatible Vectors for Fast Assembly of Multigenic Constructs and Their Use to Create Geminiviral Expression Vectors.

Jakub Dusek, Helena Plchova, Noemi Cerovska, Zuzana Poborilova, Oldrich Navratil, Katerina Kratochvilova, Cornelius Gunter, Raygaana Jacobs, Inga I Hitzeroth, Edward P Rybicki and 1 more

Abstract read
In one paragraph

Article in Frontiers in plant science, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Gibberellin-deactivating GA2OX enzymes act as a hub for auxin-gibberellin cross talk inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. The fate and function of theFrontiers in plant science · 2025
    Article
  8. Article
  9. Article
  10. ThePlant signaling & behavior · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Plant-based biopharmaceutical engineering.Nature reviews bioengineering · 2023
    Review
  15. Review
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Jakub DusekLaboratory of Virology, Institute of Experimental Botany of the Czech Academy of Sciences, Prague, Czechia.
Helena PlchovaLaboratory of Virology, Institute of Experimental Botany of the Czech Academy of Sciences, Prague, Czechia.
Noemi CerovskaLaboratory of Virology, Institute of Experimental Botany of the Czech Academy of Sciences, Prague, Czechia.
Zuzana PoborilovaLaboratory of Virology, Institute of Experimental Botany of the Czech Academy of Sciences, Prague, Czechia.
Oldrich NavratilLaboratory of Virology, Institute of Experimental Botany of the Czech Academy of Sciences, Prague, Czechia.
Katerina KratochvilovaLaboratory of Virology, Institute of Experimental Botany of the Czech Academy of Sciences, Prague, Czechia.
Cornelius GunterBiopharming Research Unit, Department of Molecular and Cell Biology, University of Cape Town, Cape Town, South Africa.
Raygaana JacobsBiopharming Research Unit, Department of Molecular and Cell Biology, University of Cape Town, Cape Town, South Africa.
Inga I HitzerothBiopharming Research Unit, Department of Molecular and Cell Biology, University of Cape Town, Cape Town, South Africa.
Edward P RybickiBiopharming Research Unit, Department of Molecular and Cell Biology, University of Cape Town, Cape Town, South Africa.
Tomas MoravecLaboratory of Virology, Institute of Experimental Botany of the Czech Academy of Sciences, Prague, Czechia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Methods for simple and fast assembly of exchangeable standard DNA parts using Type II S restriction enzymes are becoming more and more popular in plant synthetic and molecular biology. These methods enable routine construction of large and complex multigene DNA structures. Two available frameworks emphasize either high cloning capacity (Modular Cloning, MoClo) or simplicity (GoldenBraid, GB). Here we present a set of novel α-level plasmids compatible with the GB convention that extend the ability of GB to rapidly assemble more complex genetic constructs, while maintaining compatibility with all existing GB parts as well as most MoClo parts and GB modules. With the use of our new plasmids, standard GB parts can be assembled into complex assemblies containing 1, 5, 10 and up to theoretically 50 units in each successive level of infinite loop assembly. Assembled DNA constructs can be also combined with conventional binary GB-assemblies (1, 2, 4, 8… units). We demonstrate the usefulness of our framework on single tube assembly of replicating plant expression constructs based on the geminivirus Bean yellow dwarf virus (BeYDV).

Indexed as

Agrobacterium tumefacienscloningNicotiana benthamianaplant virus vectorsynthetic biologytransient expression

Identifiers

PMID33193468
PMCPMC7641900

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.