ArticleFrontiers in microbiology2020
Representing Organic Matter Thermodynamics in Biogeochemical Reactions via Substrate-Explicit Modeling.
Article in Frontiers in microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
16 citing papers in PubMed, 92 citations in OpenAlex.
- LambdaPy and LambdaR: Thermodynamics-Based Biogeochemical Reaction Modeling Packages for Integrating High-Resolution Mass Spectrometry Data.Methods in molecular biology (Clifton, N.J.) · 2026Article
- Integration of Microbial Metabolic Regulation and Abiotic Oxidation: Mechanisms of Artificial Humic Acid-Enhanced Hydroxyl Radical Generation in Paddy Soil.Research (Washington, D.C.) · 2026Article
- Logging disrupts the ecology of molecules in headwater streams.Proceedings of the National Academy of Sciences of the United States of America · 2025Article
- Article
- Coupling flux balance analysis with reactive transport modeling through machine learning for rapid and stable simulation of microbial metabolic switching.Scientific reports · 2025Article
- Organic molecules are deterministically assembled in variably inundated river sediments, but drivers remain unclear.Scientific reports · 2025Article
- Uncovering the hidden world of riverbed sediments: The role of sediment heterogeneity and cross-bar channel fills in the hydrogeochemical dynamics of the hyporheic zone.Journal of hydrology · 2024Article
- Unveiling the deterministic dynamics of microbial meta-metabolism: a multi-omics investigation of anaerobic biodegradation.Microbiome · 2024Article
- Thermal responses of dissolved organic matter under global change.Nature communications · 2024Article
- Rethinking Aerobic Respiration in the Hyporheic Zone under Variation in Carbon and Nitrogen Stoichiometry.Environmental science & technology · 2023Article
- Ecological networks of dissolved organic matter and microorganisms under global change.Nature communications · 2022Article
- Interacting Bioenergetic and Stoichiometric Controls on Microbial Growth.Frontiers in microbiology · 2022Article
- Energetic scaling in microbial growth.Proceedings of the National Academy of Sciences of the United States of America · 2021Article
- Article
- Article
- Representing Organic Matter Thermodynamics in Biogeochemical Reactions via Substrate-Explicit Modeling.Frontiers in microbiology · 2020Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
9 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Predictive biogeochemical modeling requires data-model integration that enables explicit representation of the sophisticated roles of microbial processes that transform substrates. Data from high-resolution organic matter (OM) characterization are increasingly available and can serve as a critical resource for this purpose, but their incorporation into biogeochemical models is often prohibited due to an over-simplified description of reaction networks. To fill this gap, we proposed a new concept of biogeochemical modeling-termed
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.