Evidence map›Paper›PMID 33191914›Full record

ArticleeLife2020

Increased processing of SINE B2 ncRNAs unveils a novel type of transcriptome deregulation in amyloid beta neuropathology.

Yubo Cheng, Luke Saville, Babita Gollen, Christopher Isaac, Abel Belay, Jogender Mehla, Kush Patel, Nehal Thakor, Majid H Mohajerani, Athanasios Zovoilis

Open access · goldAbstract read
In one paragraph

Article in eLife, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Review
  15. Review
  16. Article
  17. Review
  18. Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Yubo Cheng *Department of Chemistry and Biochemistry, University of Lethbridge, Lethbridge, Canada.
Luke Saville *Department of Chemistry and Biochemistry, University of Lethbridge, Lethbridge, Canada.ORCID 0000-0002-9480-1268
Babita Gollen *Department of Chemistry and Biochemistry, University of Lethbridge, Lethbridge, Canada.
Christopher Isaac *Department of Chemistry and Biochemistry, University of Lethbridge, Lethbridge, Canada.
Abel BelayDepartment of Chemistry and Biochemistry, University of Lethbridge, Lethbridge, Canada.
Jogender MehlaCanadian Centre for Behavioral Neuroscience, University of Lethbridge, Lethbridge, Canada.
Kush PatelDepartment of Chemistry and Biochemistry, University of Lethbridge, Lethbridge, Canada.
Nehal ThakorDepartment of Chemistry and Biochemistry, University of Lethbridge, Lethbridge, Canada.
Majid H MohajeraniCanadian Centre for Behavioral Neuroscience, University of Lethbridge, Lethbridge, Canada.ORCID 0000-0003-0964-2977
Athanasios ZovoilisDepartment of Chemistry and Biochemistry, University of Lethbridge, Lethbridge, Canada.ORCID 0000-0001-6425-0402
University of Lethbridge · CA

Funding

Alberta Innovates 201700011Alzheimer Society of Alberta and Northwest Territories 201900003Natural Sciences and Engineering Research Council of Canada RGPIN-2018-05955
6 · The paper itself

Abstract

The functional importance of many non-coding RNAs (ncRNAs) generated by repetitive elements and their connection with pathologic processes remains elusive. B2 RNAs, a class of ncRNAs of the B2 family of SINE repeats, mediate through their processing the transcriptional activation of various genes in response to stress. Here, we show that this response is dysfunctional during amyloid beta toxicity and pathology in the mouse hippocampus due to increased levels of B2 RNA processing, leading to constitutively elevated B2 RNA target gene expression and high

Indexed as

Amyloid beta-PeptidesAnimalsCell LineComputational BiologyHeat Shock Transcription FactorsMiceRNA, UntranslatedShort Interspersed Nucleotide ElementsTranscriptomeAmyloid beta-PeptidesHeat Shock Transcription FactorsHsf1 protein, mouseRNA, Untranslatedamyloid beta pathologyB2 RNAgeneticsgenomicshippocampusmouseneurosciencenon-coding RNAsSINEtranscriptome

Identifiers

PMID33191914
PMCPMC7717908
OpenAlexW3101268760

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.