Evidence map›Paper›PMID 33191750›Full record

ArticleThe journal of physical chemistry letters2020

Revealing the Hidden Sensitivity of Intrinsically Disordered Proteins to their Chemical Environment.

David Moses, Feng Yu, Garrett M Ginell, Nora M Shamoon, Patrick S Koenig, Alex S Holehouse, Shahar Sukenik

Open access · greenAbstract read
In one paragraph

Article in The journal of physical chemistry letters, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 92 citations in OpenAlex.

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  12. Intrinsic stiffness andPNAS nexus · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

David MosesChemistry and Chemical Biology Program, University of California, Merced, California, United States.
Feng YuThe Center for Cellular and Biomolecular Machines (CCBM), University of California, Merced, California, United States.
Garrett M GinellDepartment of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, Missouri, United States.
Nora M ShamoonCalifornia State University Stanislaus, Turlock, California, United States.
Patrick S KoenigQuantitative Systems Biology Program, University of California, Merced, California, United States.
Alex S HolehouseDepartment of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, Missouri, United States.ORCID http://orcid.org/0000-0002-4155-5729
Shahar SukenikChemistry and Chemical Biology Program, University of California, Merced, California, United States.ORCID http://orcid.org/0000-0003-3855-9574
University of California, Merced · USWashington University in St. Louis · USCalifornia State University, Stanislaus · US

Funding

Uncovering the structural underpinnings of function in disordered transcription factor regionsR35GM137926 · NIGMS · UNIVERSITY OF CALIFORNIA, MERCED · PI Shahar Sukenik · 2020 to 2026
$2.5M
NIGMS NIH HHS R35 GM137926
6 · The paper itself

Abstract

Intrinsically disordered protein-regions (IDRs) make up roughly 30% of the human proteome and are central to a wide range of biological processes. Given a lack of persistent tertiary structure, all residues in IDRs are, to some extent, solvent exposed. This extensive surface area, coupled with the absence of strong intramolecular contacts, makes IDRs inherently sensitive to their chemical environment. We report a combined experimental, computational, and analytical framework for high-throughput characterization of IDR sensitivity. Our framework reveals that IDRs can expand or compact in response to changes in their solution environment. Importantly, the direction and magnitude of conformational change depend on both protein sequence and cosolute identity. For example, some solutes such as short polyethylene glycol chains exert an expanding effect on some IDRs and a compacting effect on others. Despite this complex behavior, we can rationally interpret IDR responsiveness to solution composition changes using relatively simple polymer models. Our results imply that solution-responsive IDRs are ubiquitous and can provide an additional layer of regulation to biological systems.

Indexed as

Fluorescence Resonance Energy TransferHigh-Throughput Screening AssaysHumansIntrinsically Disordered ProteinsProtein ConformationSolutionsSurface PropertiesIntrinsically Disordered ProteinsSolutions

Identifiers

PMID33191750
PMCPMC8092420
OpenAlexW3103574276

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.