Evidence map›Paper›PMID 33188571›Full record

ArticleJournal of biomedical optics2020

Automatic detection and characterization of quantitative phase images of thalassemic red blood cells using a mask region-based convolutional neural network.

Yang-Hsien Lin, Ken Y-K Liao, Kung-Bin Sung

Abstract read
In one paragraph

Article in Journal of biomedical optics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Automatic Image Segmentation of Monocytes and Index Computation Using Deep Learning.Proceedings. IEEE International Conference on Bioinformatics and Biomedicine · 2022
    Article
  8. Article
  9. Article
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4 · The record

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5 · Who and what money

Authors and funding

3 authors.

Yang-Hsien LinNational Taiwan University, Graduate Institute of Biomedical Electronics and Bioinformatics, Taipei, Taiwan.
Ken Y-K LiaoFeng Chia University, College of Information and Electrical Engineering, Taichung, Taiwan.
Kung-Bin SungNational Taiwan University, Graduate Institute of Biomedical Electronics and Bioinformatics, Taipei, Taiwan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

significanceLabel-free quantitative phase imaging is a promising technique for the automatic detection of abnormal red blood cells (RBCs) in real time. Although deep-learning techniques can accurately detect abnormal RBCs from quantitative phase images efficiently, their applications in diagnostic testing are limited by the lack of transparency. More interpretable results such as morphological and biochemical characteristics of individual RBCs are highly desirable.

aimAn end-to-end deep-learning model was developed to efficiently discriminate thalassemic RBCs (tRBCs) from healthy RBCs (hRBCs) in quantitative phase images and segment RBCs for single-cell characterization. APPROACH: Two-dimensional quantitative phase images of hRBCs and tRBCs were acquired using digital holographic microscopy. A mask region-based convolutional neural network (Mask R-CNN) model was trained to discriminate tRBCs and segment individual RBCs. Characterization of tRBCs was achieved utilizing SHapley Additive exPlanation analysis and canonical correlation analysis on automatically segmented RBC phase images.

resultsThe implemented model achieved 97.8% accuracy in detecting tRBCs. Phase-shift statistics showed the highest influence on the correct classification of tRBCs. Associations between the phase-shift features and three-dimensional morphological features were revealed.

conclusionsThe implemented Mask R-CNN model accurately identified tRBCs and segmented RBCs to provide single-RBC characterization, which has the potential to aid clinical decision-making.

Indexed as

HolographyNeural Networks, ComputerErythrocyte CountErythrocytesdigital holographic microscopymask region-based convolutional neural networkquantitative phase imagingred blood cellthalassemia

Identifiers

PMID33188571
PMCPMC7665881

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.