Evidence map›Paper›PMID 33188299›Full record

ArticleThe ISME journal2021

Plant part and a steep environmental gradient predict plant microbial composition in a tropical watershed.

Jared Bernard, Christopher B Wall, Maria S Costantini, Randi L Rollins, Melissa L Atkins, Feresa P Cabrera, Nicolas D Cetraro, Christian K J Feliciano, Austin L Greene, Philip K Kitamura and 7 more

Open access · bronzeAbstract read
In one paragraph

Article in The ISME journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
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  4. Ecological mechanisms of microbial assembly in clonal plantApplied and environmental microbiology · 2025
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  12. A ridge-to-reef ecosystem microbial census reveals environmental reservoirs for animal and plant microbiomes.Proceedings of the National Academy of Sciences of the United States of America · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 1 institution in 1 country.

Jared BernardDepartment of Plant and Environmental Protection Sciences, University of Hawai'i-Mānoa, 3050 Maile Way, Honolulu, HI, 96822, USA.ORCID http://orcid.org/0000-0003-4094-2839
Christopher B WallHawai'i Institute of Marine Biology, University of Hawai'i-Mānoa, 46-007 Lilipuna Road, Kāne'ohe, HI, 96744, USA.
Maria S CostantiniDepartment of Biology, University of Hawai'i-Mānoa, 2538 McCarthy Mall, Honolulu, HI, 96822, USA.
Randi L RollinsPacific Biosciences Research Center, University of Hawai'i-Mānoa, 3050 Maile Way, Honolulu, HI, 96822, USA.ORCID http://orcid.org/0000-0002-3768-4499
Melissa L AtkinsDepartment of Biology, University of Hawai'i-Mānoa, 2538 McCarthy Mall, Honolulu, HI, 96822, USA.ORCID http://orcid.org/0000-0002-9361-0988
Feresa P CabreraDepartment of Botany, University of Hawai'i-Mānoa, 3190 Maile Way, Honolulu, HI, 96822, USA.
Nicolas D CetraroPacific Biosciences Research Center, University of Hawai'i-Mānoa, 3050 Maile Way, Honolulu, HI, 96822, USA.
Christian K J FelicianoDepartment of Botany, University of Hawai'i-Mānoa, 3190 Maile Way, Honolulu, HI, 96822, USA.
Austin L GreeneDepartment of Biology, University of Hawai'i-Mānoa, 2538 McCarthy Mall, Honolulu, HI, 96822, USA.
Philip K KitamuraDepartment of Natural Resources and Environmental Management, University of Hawai'i-Mānoa, 1910 East-West Road, Honolulu, HI, 96822, USA.
Alejandro Olmedo-VelardeDepartment of Plant and Environmental Protection Sciences, University of Hawai'i-Mānoa, 3050 Maile Way, Honolulu, HI, 96822, USA.ORCID http://orcid.org/0000-0003-1688-0455
Vithanage N S SirimalwattaDepartment of Botany, University of Hawai'i-Mānoa, 3190 Maile Way, Honolulu, HI, 96822, USA.
Helen W SungDepartment of Biology, University of Hawai'i-Mānoa, 2538 McCarthy Mall, Honolulu, HI, 96822, USA.
Leah P M ThompsonDepartment of Botany, University of Hawai'i-Mānoa, 3190 Maile Way, Honolulu, HI, 96822, USA.
Huong T VuDepartment of Molecular Biosciences and Bioengineering, University of Hawai'i-Mānoa, 1955 East-West Road, Honolulu, HI, 96822, USA.
Chad J WilhiteDepartment of Natural Resources and Environmental Management, University of Hawai'i-Mānoa, 1910 East-West Road, Honolulu, HI, 96822, USA.
Anthony S AmendDepartment of Botany, University of Hawai'i-Mānoa, 3190 Maile Way, Honolulu, HI, 96822, USA. amend@hawaii.edu.ORCID http://orcid.org/0000-0002-0983-2984
University of Hawaiʻi at Mānoa · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant microbiomes are shaped by forces working at different spatial scales. Environmental factors determine a pool of potential symbionts while host physiochemical factors influence how those microbes associate with distinct plant tissues. These scales are seldom considered simultaneously, despite their potential to interact. Here, we analyze epiphytic microbes from nine Hibiscus tiliaceus trees across a steep, but short, environmental gradient within a single Hawaiian watershed. At each location, we sampled eight microhabitats: leaves, petioles, axils, stems, roots, and litter from the plant, as well as surrounding air and soil. The composition of bacterial communities is better explained by microhabitat, while location better predicted compositional variance for fungi. Fungal community compositional dissimilarity increased more rapidly along the gradient than did bacterial composition. Additionally, the rates of fungal community compositional dissimilarity along the gradient differed among plant parts, and these differences influenced the distribution patterns and range size of individual taxa. Within plants, microbes were compositionally nested such that aboveground communities contained a subset of the diversity found belowground. Our findings indicate that both environmental context and microhabitat contribute to microbial compositional variance in our study, but that these contributions are influenced by the domain of microbe and the specific microhabitat in question, suggesting a complicated and potentially interacting dynamic.

Indexed as

FungiPlantsBacteriaHawaiiPlant RootsSoil Microbiology

Identifiers

PMID33188299
PMCPMC8115680
OpenAlexW3100811558

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.