Evidence map›Paper›PMID 33188250›Full record

ArticleCommunications biology2020

A GDSL lipase-like from Ipomoea batatas catalyzes efficient production of 3,5-diCQA when expressed in Pichia pastoris.

Sissi Miguel, Guillaume Legrand, Léonor Duriot, Marianne Delporte, Barbara Menin, Cindy Michel, Alexandre Olry, Gabrielle Chataigné, Aleksander Salwinski, Joakim Bygdell and 6 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Communications biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 3 countries.

Sissi MiguelPlant Advanced Technologies, Vandœuvre-lès-Nancy, France.
Guillaume LegrandUMR Transfrontalière BioEcoAgro N° 1158, Univ. Lille, INRAE, Univ. Liège, UPJV, ISA, Univ. Artois, Univ. Littoral Côte d'Opale, ICV - Institut Charles Viollette, 59000, Lille, France.
Léonor DuriotPlant Advanced Technologies, Vandœuvre-lès-Nancy, France.
Marianne DelporteUMR Transfrontalière BioEcoAgro N° 1158, Univ. Lille, INRAE, Univ. Liège, UPJV, ISA, Univ. Artois, Univ. Littoral Côte d'Opale, ICV - Institut Charles Viollette, 59000, Lille, France.
Barbara MeninUniversité de Lorraine-INRAE, LAE, 54000, Nancy, France.
Cindy MichelPlant Advanced Technologies, Vandœuvre-lès-Nancy, France.
Alexandre OlryUniversité de Lorraine-INRAE, LAE, 54000, Nancy, France.
Gabrielle ChataignéUMR Transfrontalière BioEcoAgro N° 1158, Univ. Lille, INRAE, Univ. Liège, UPJV, ISA, Univ. Artois, Univ. Littoral Côte d'Opale, ICV - Institut Charles Viollette, 59000, Lille, France.
Aleksander SalwinskiPlant Advanced Technologies, Vandœuvre-lès-Nancy, France.
Joakim BygdellChemistry Department, Umeå University, 90183, Umeå, Sweden.
Dominique VercaigneUMR Transfrontalière BioEcoAgro N° 1158, Univ. Lille, INRAE, Univ. Liège, UPJV, ISA, Univ. Artois, Univ. Littoral Côte d'Opale, ICV - Institut Charles Viollette, 59000, Lille, France.
Gunnar WingsleUmeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, 90183, Umeå, Sweden.
Jean Louis HilbertUMR Transfrontalière BioEcoAgro N° 1158, Univ. Lille, INRAE, Univ. Liège, UPJV, ISA, Univ. Artois, Univ. Littoral Côte d'Opale, ICV - Institut Charles Viollette, 59000, Lille, France.ORCID 0000-0002-0561-6483
Frédéric BourgaudPlant Advanced Technologies, Vandœuvre-lès-Nancy, France. frederic.bourgaud@plantadvanced.com.
Alain HehnUniversité de Lorraine-INRAE, LAE, 54000, Nancy, France. Alain.Hehn@univ-lorraine.fr.ORCID 0000-0003-4507-8031
David GagneulUMR Transfrontalière BioEcoAgro N° 1158, Univ. Lille, INRAE, Univ. Liège, UPJV, ISA, Univ. Artois, Univ. Littoral Côte d'Opale, ICV - Institut Charles Viollette, 59000, Lille, France. David.Gagneul@univ-lille.fr.
Université de Lille · FRAdvanced Systems & Technologies (United States) · USInstitut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement · FRCarnegie Department of Plant Biology · USSwedish University of Agricultural Sciences · SEUmeå University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The synthesis of 3,5-dicaffeoylquinic acid (3,5-DiCQA) has attracted the interest of many researchers for more than 30 years. Recently, enzymes belonging to the BAHD acyltransferase family were shown to mediate its synthesis, albeit with notably low efficiency. In this study, a new enzyme belonging to the GDSL lipase-like family was identified and proven to be able to transform chlorogenic acid (5-O-caffeoylquinic acid, 5-CQA, CGA) in 3,5-DiCQA with a conversion rate of more than 60%. The enzyme has been produced in different expression systems but has only been shown to be active when transiently synthesized in Nicotiana benthamiana or stably expressed in Pichia pastoris. The synthesis of the molecule could be performed in vitro but also by a bioconversion approach beginning from pure 5-CQA or from green coffee bean extract, thereby paving the road for producing it on an industrial scale.

Indexed as

Ipomoea batatasLipasePlant ProteinsQuinic AcidRecombinant ProteinsSaccharomycetalescaffeoylquinic acidLipasePlant ProteinsQuinic AcidRecombinant Proteins

Identifiers

PMID33188250
PMCPMC7666189
OpenAlexW3105497026

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.