Evidence map›Paper›PMID 33188182›Full record

ArticleNature communications2020

Co-regulation of the transcription controlling ATF2 phosphoswitch by JNK and p38.

Klára Kirsch, András Zeke, Orsolya Tőke, Péter Sok, Ashish Sethi, Anna Sebő, Ganesan Senthil Kumar, Péter Egri, Ádám L Póti, Paul Gooley and 4 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 68 citations in OpenAlex.

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  14. Stimulus-Dependent Expression ofThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2025
    Article
  15. Bipartite binding of the intrinsically disordered scaffold protein JIP1 to the kinase JNK1.Proceedings of the National Academy of Sciences of the United States of America · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 4 countries.

Klára KirschBiomolecular Interactions Research Group, Institute of Organic Chemistry, Research Center for Natural Sciences, H-1117, Budapest, Hungary.
András ZekeBiomolecular Interactions Research Group, Institute of Organic Chemistry, Research Center for Natural Sciences, H-1117, Budapest, Hungary.ORCID 0000-0002-5229-8617
Orsolya TőkeLaboratory for NMR Spectroscopy, Research Center for Natural Sciences, H-1117, Budapest, Hungary.
Péter SokBiomolecular Interactions Research Group, Institute of Organic Chemistry, Research Center for Natural Sciences, H-1117, Budapest, Hungary.ORCID 0000-0001-8963-8163
Ashish SethiDepartment of Biochemistry and Molecular Biology and Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, VIC, 3010, Australia.ORCID 0000-0003-4220-3597
Anna SebőBiomolecular Interactions Research Group, Institute of Organic Chemistry, Research Center for Natural Sciences, H-1117, Budapest, Hungary.
Ganesan Senthil KumarDepartment of Chemistry and Biochemistry, University of Arizona, Tucson, AZ, USA.
Péter EgriBiomolecular Interactions Research Group, Institute of Organic Chemistry, Research Center for Natural Sciences, H-1117, Budapest, Hungary.
Ádám L PótiBiomolecular Interactions Research Group, Institute of Organic Chemistry, Research Center for Natural Sciences, H-1117, Budapest, Hungary.
Paul GooleyDepartment of Biochemistry and Molecular Biology and Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, VIC, 3010, Australia.ORCID 0000-0002-0323-449X
Wolfgang PetiDepartment of Chemistry and Biochemistry, University of Arizona, Tucson, AZ, USA.ORCID 0000-0002-8830-6594
Isabel BentoEuropean Molecular Biology Laboratory, Hamburg, Germany.
Anita AlexaBiomolecular Interactions Research Group, Institute of Organic Chemistry, Research Center for Natural Sciences, H-1117, Budapest, Hungary.
Attila ReményiBiomolecular Interactions Research Group, Institute of Organic Chemistry, Research Center for Natural Sciences, H-1117, Budapest, Hungary. remenyi.attila@ttk.hu.ORCID 0000-0002-8345-1311
Institute of Organic Chemistry · HUThe University of Melbourne · AUUniversity of Arizona · USEuropean Molecular Biology Laboratory · DEHUN-REN Research Centre for Natural Sciences · HUInstitute of Materials and Environmental Chemistry · HU

Funding

Dynamics & energetics of p38a kinase regulation by ligandsR01GM100910 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI PETI, WOLFGANG, WAND, A. JOSHUA · 2013 to 2016
$1.3M
NIGMS NIH HHS R01 GM100910
6 · The paper itself

Abstract

Transcription factor phosphorylation at specific sites often activates gene expression, but how environmental cues quantitatively control transcription is not well-understood. Activating protein 1 transcription factors are phosphorylated by mitogen-activated protein kinases (MAPK) in their transactivation domains (TAD) at so-called phosphoswitches, which are a hallmark in response to growth factors, cytokines or stress. We show that the ATF2 TAD is controlled by functionally distinct signaling pathways (JNK and p38) through structurally different MAPK binding sites. Moreover, JNK mediated phosphorylation at an evolutionarily more recent site diminishes p38 binding and made the phosphoswitch differently sensitive to JNK and p38 in vertebrates. Structures of MAPK-TAD complexes and mechanistic modeling of ATF2 TAD phosphorylation in cells suggest that kinase binding motifs and phosphorylation sites line up to maximize MAPK based co-regulation. This study shows how the activity of an ancient transcription controlling phosphoswitch became dependent on the relative flux of upstream signals.

Indexed as

Gene Expression RegulationTranscription, GeneticActivating Transcription Factor 2Amino Acid MotifsAmino Acid SequenceHEK293 CellsHumansJNK Mitogen-Activated Protein KinasesLuciferasesMagnetic Resonance SpectroscopyModels, Molecularp38 Mitogen-Activated Protein KinasesPhosphorylationProtein BindingZinc FingersActivating Transcription Factor 2JNK Mitogen-Activated Protein KinasesLuciferasesp38 Mitogen-Activated Protein Kinases

Identifiers

PMID33188182
PMCPMC7666158
OpenAlexW3103753279

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.