Evidence map›Paper›PMID 33187991›Full record

ArticleApplied and environmental microbiology2021

Phylogenetic and Biogeographic Patterns of Vibrio parahaemolyticus Strains from North America Inferred from Whole-Genome Sequence Data.

John J Miller, Bart C Weimer, Ruth Timme, Catharina H M Lüdeke, James B Pettengill, DJ Darwin Bandoy, Allison M Weis, James Kaufman, B Carol Huang, Justin Payne and 2 more

Erratum issuedAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

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  6. High genomic diversity ofMicrobial genomics · 2025
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  8. Antimicrobial resistance ofApplied and environmental microbiology · 2025
    Article
  9. Article
  10. Genomic Insights intoMicroorganisms · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Predator-Prey Interactions betweenMicrobiology spectrum · 2023
    Article
  17. Article
  18. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

John J MillerFDA, Biostatistics and Bioinformatics Staff, College Park, Maryland, USA.
Bart C WeimerUniversity of California-Davis, Institute for Veterinary Medicine, Davis, California, USA.
Ruth TimmeFDA, Division of Microbiology, College Park, Maryland, USA.ORCID 0000-0002-9705-5897
Catharina H M LüdekeFDA, Division of Seafood Science and Technology, Gulf Coast Seafood Laboratory, Dauphin Island, Alabama, USA.
James B PettengillFDA, Biostatistics and Bioinformatics Staff, College Park, Maryland, USA.
DJ Darwin BandoyUniversity of California-Davis, Institute for Veterinary Medicine, Davis, California, USA.
Allison M WeisUniversity of California-Davis, Institute for Veterinary Medicine, Davis, California, USA.
James KaufmanIBM Research, Almaden, San Jose, California, USA.
B Carol HuangUniversity of California-Davis, Institute for Veterinary Medicine, Davis, California, USA.
Justin PayneFDA, Division of Microbiology, College Park, Maryland, USA.
Errol StrainFDA, Biostatistics and Bioinformatics Staff, College Park, Maryland, USA.
Jessica L JonesFDA, Division of Seafood Science and Technology, Gulf Coast Seafood Laboratory, Dauphin Island, Alabama, USA Jessica.Jones@fda.hhs.gov.ORCID 0000-0002-5077-216X

Funding

Determining how the human gut microbiota modulates colon cancer tumorigenesisF32CA243501 · NCI · UNIVERSITY OF UTAH · PI WEIS, ALLISON · 2019 to 2021
$200k
NCI NIH HHS F32 CA243501
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

AnimalsBiological MonitoringGenes, BacterialGenome, BacterialHumansNorth AmericaOstreidaePhylogenyVibrio InfectionsVibrio parahaemolyticusVirulenceWhole Genome Sequencingcluster analysisgenomicskSNPMLSTphylogeneticsVibrio parahaemolyticus

Identifiers

PMID33187991
PMCPMC7848924

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.