Evidence map›Paper›PMID 33187156›Full record

ReviewNon-coding RNA2020

Seeing Is Believing: Visualizing Circular RNAs.

Pruthvi Raj Bejugam, Aniruddha Das, Amaresh Chandra Panda

Open access · goldAbstract readReview
In one paragraph

Review in Non-coding RNA, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 22 citations in OpenAlex.

  1. Use of Automated BaseScope Assay on the Leica BOND RX.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  2. Review
  3. Review
  4. Review
  5. Review
  6. Article
  7. CircR-loop: a novel RNA:DNA interaction on genome instability.Cellular & molecular biology letters · 2024
    Review
  8. Circular RNAs: characteristics, functions, mechanisms, and potential applications in thyroid cancer.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2024
    Review
  9. Article
  10. Review
  11. Article
  12. The role of circular RNAs in pulmonary hypertension.The European respiratory journal · 2022
    Review
  13. Article
  14. Anatomical Methods to Study the Suprachiasmatic Nucleus.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  15. Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Pruthvi Raj BejugamInstitute of Life Sciences, Nalco Square, Bhubaneswar, Odisha 751023, India.ORCID 0000-0002-0802-9153
Aniruddha DasInstitute of Life Sciences, Nalco Square, Bhubaneswar, Odisha 751023, India.
Amaresh Chandra PandaInstitute of Life Sciences, Nalco Square, Bhubaneswar, Odisha 751023, India.ORCID 0000-0003-3189-8995
Institute of Life Sciences · IN

Funding

The Wellcome Trust DBT India Alliance IA/I/18/2/504017
6 · The paper itself

Abstract

Advancement in the RNA sequencing techniques has discovered hundreds of thousands of circular RNAs (circRNAs) in humans. However, the physiological function of most of the identified circRNAs remains unexplored. Recent studies have established that spliceosomal machinery and RNA-binding proteins modulate circRNA biogenesis. Furthermore, circRNAs have been implicated in regulating crucial cellular processes by interacting with various proteins and microRNAs. However, there are several challenges in understanding the mechanism of circRNA biogenesis, transport, and their interaction with cellular factors to regulate cellular events because of their low abundance and sequence similarity with linear RNA. Addressing these challenges requires systematic studies that directly visualize the circRNAs in cells at single-molecule resolution along with the molecular regulators. In this review, we present the design, benefits, and weaknesses of RNA imaging techniques such as single-molecule RNA fluorescence in situ hybridization and BaseScope in fixed cells and fluorescent RNA aptamers in live-cell imaging of circRNAs. Furthermore, we propose the potential use of molecular beacons, multiply labeled tetravalent RNA imaging probes, and Cas-derived systems to visualize circRNAs.

Indexed as

aptamerBaseScopecircRNAFISHlocalizationmiRNARNA-binding protein

Identifiers

PMID33187156
PMCPMC7712394
OpenAlexW3099275908

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.