Evidence map›Paper›PMID 33180866›Full record

ArticlePloS one2020

Ikaros antagonizes DNA binding by STAT5 in pre-B cells.

Beate Heizmann, Stéphanie Le Gras, Célestine Simand, Patricia Marchal, Susan Chan, Philippe Kastner

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.8field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. IKAROS Family Transcription Factors in Lymphocyte Differentiation and Function.Advances in experimental medicine and biology · 2024
    Review
  6. Article
  7. Aiolos represses CD4Nature communications · 2023
    Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Beate HeizmannInstitut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Illkirch, France.ORCID 0000-0002-4236-2937
Stéphanie Le GrasInstitut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Illkirch, France.
Célestine SimandInstitut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Illkirch, France.
Patricia MarchalInstitut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Illkirch, France.
Susan ChanInstitut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Illkirch, France.
Philippe KastnerInstitut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Illkirch, France.
Centre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The IKZF1 gene, which encodes the Ikaros transcription factor, is frequently deleted or mutated in patients with B-cell precursor acute lymphoblastic leukemias that express oncogenes, like BCR-ABL, which activate the JAK-STAT5 pathway. Ikaros functionally antagonizes the transcriptional programs downstream of IL-7/STAT5 during B cell development, as well as STAT5 activity in leukemic cells. However, the mechanisms by which Ikaros interferes with STAT5 function is unknown. We studied the genomic distribution of Ikaros and STAT5 on chromatin in a murine pre-B cell line, and found that both proteins colocalize on >60% of STAT5 target regions. Strikingly, Ikaros activity leads to widespread loss of STAT5 binding at most of its genomic targets within two hours of Ikaros induction, suggesting a direct mechanism. Ikaros did not alter the level of total or phosphorylated STAT5 proteins, nor did it associate with STAT5. Using sequences from the Cish, Socs2 and Bcl6 genes that Ikaros and STAT5 target, we show that both proteins bind overlapping sequences at GGAA motifs. Our results demonstrate that Ikaros antagonizes STAT5 DNA binding, in part by competing for common target sequences. Our study has implications for understanding the functions of Ikaros and STAT5 in B cell development and transformation.

Indexed as

AnimalsBase SequenceCell LineChromatinDNAIkaros Transcription FactorInterleukin-17MiceMice, KnockoutPhosphorylationPrecursor Cells, B-LymphoidProtein BindingSTAT5 Transcription FactorSuppressor of Cytokine Signaling ProteinsUp-RegulationChromatinDNAIkaros Transcription FactorInterleukin-17Socs2 protein, mouseSTAT5 Transcription FactorSuppressor of Cytokine Signaling ProteinsZfpn1a1 protein, mouse

Identifiers

PMID33180866
PMCPMC7660478
OpenAlexW3103392581

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.