Evidence map›Paper›PMID 33180370›Full record

ArticleChembiochem : a European journal of chemical biology2021

Metabolic Glycoengineering with Azide- and Alkene-Modified Hexosamines: Quantification of Sialic Acid Levels.

Jeremias E G A Dold, Valentin Wittmann

Open access · hybridAbstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
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  9. Recombinant mucin biotechnology and engineering.Advanced drug delivery reviews · 2023
    Review
  10. Article
  11. Article
  12. Article
  13. Chemical reporters to study mammalian O-glycosylation.Biochemical Society transactions · 2021
    Review
  14. Article
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Jeremias E G A DoldUniversity of Konstanz, Department of Chemistry and Konstanz Research School Chemical Biology (KoRS-CB), 78457, Konstanz, Germany.
Valentin WittmannUniversity of Konstanz, Department of Chemistry and Konstanz Research School Chemical Biology (KoRS-CB), 78457, Konstanz, Germany.ORCID 0000-0003-4043-6813
University of Konstanz · DE

Funding

Deutsche Forschungsgemeinschaft SPP 1623, SFB 969 project B05Konstanz Research School Chemical BiologyMinisterium für Wissenschaft, Forschung und Kunst Baden-WürttembergUniversity of Konstanz
6 · The paper itself

Abstract

Metabolic glycoengineering (MGE) is an established method to incorporate chemical reporter groups into cellular glycans for subsequent bioorthogonal labeling. The method has found broad application for the visualization and isolation of glycans allowing their biological roles to be probed. Furthermore, targeting of drugs to cancer cells that present high concentrations of sialic acids on their surface is an attractive approach. We report the application of a labeling reaction using 1,2-diamino-4,5-methylenedioxybenzene for the quantification of sialic acid derivates after MGE with various azide- and alkene-modified ManNAc, GlcNAc, and GalNAc derivatives. We followed the time course of sialic acid production and were able to detect sialic acids modified with the chemical reporter group - not only after addition of ManNAc derivatives to the cell culture. A cyclopropane-modified ManNAc derivative, being a model for the corresponding cyclopropene analog, which undergoes fast inverse-electron-demand Diels-Alder reactions with 1,2,4,5-tetrazines, resulted in the highest incorporation efficiency. Furthermore, we investigated whether feeding the cells with natural and unnatural ManNAc derivative results in increased levels of sialic acids and found that this is strongly dependent on the investigated cell type and cell fraction. For HEK 293T cells, a strong increase in free sialic acids in the cell interior was found, whereas cell-surface sialic acid levels are only moderately increased.

Indexed as

Metabolic EngineeringAlkenesAzidesCycloaddition ReactionFluorescent DyesHEK293 CellsHeLa CellsHexosaminesHumansMicroscopy, FluorescenceN-Acetylneuraminic AcidAlkenesAzidesFluorescent DyesHexosaminesN-Acetylneuraminic Acidbioorthogonal chemistrycarbohydratesDMB labelingmetabolic engineeringsialic acids

Identifiers

PMID33180370
PMCPMC8048827
OpenAlexW3103160258

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.