Evidence map›Paper›PMID 33179567›Full record

ArticleEmerging microbes & infections2020

Adsorptive mutation and N-linked glycosylation modulate influenza virus antigenicity and fitness.

Joshua E Sealy, Thomas P Peacock, Jean-Remy Sadeyen, Pengxiang Chang, Holly J Everest, Sushant Bhat, Munir Iqbal

Open access · goldAbstract read
In one paragraph

Article in Emerging microbes & infections, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Joshua E SealyAvian Influenza, The Pirbright Institute, Woking, UK.ORCID https://orcid.org/0000-0001-8466-9358
Thomas P PeacockDepartment of Infectious Diseases, Imperial College London, London, UK.
Jean-Remy SadeyenAvian Influenza, The Pirbright Institute, Woking, UK.
Pengxiang ChangAvian Influenza, The Pirbright Institute, Woking, UK.
Holly J EverestAvian Influenza, The Pirbright Institute, Woking, UK.
Sushant BhatAvian Influenza, The Pirbright Institute, Woking, UK.
Munir IqbalAvian Influenza, The Pirbright Institute, Woking, UK.ORCID https://orcid.org/0000-0001-5165-5339
The Pirbright Institute · GBImperial College London · GB

Funding

Biotechnology and Biological Sciences Research Council BBS/E/I/00001708Biotechnology and Biological Sciences Research Council BBS/E/I/00007031Biotechnology and Biological Sciences Research Council BBS/E/I/00007034Biotechnology and Biological Sciences Research Council BBS/E/I/00007036Biotechnology and Biological Sciences Research Council BBS/E/I/00007038Biotechnology and Biological Sciences Research Council BBS/E/I/00007039
6 · The paper itself

Abstract

Influenza viruses have an error-prone polymerase complex that facilitates a mutagenic environment. Antigenic mutants swiftly arise from this environment with the capacity to persist in both humans and economically important livestock even in the face of vaccination. Furthermore, influenza viruses can adjust the antigenicity of the haemagglutinin (HA) protein, the primary influenza immunogen, using one of four molecular mechanisms. Two prominent mechanisms are: (1) enhancing binding avidity of HA toward cellular receptors to outcompete antibody binding and (2) amino acid substitutions that introduce an N-linked glycan on HA that sterically block antibody binding. In this study we investigate the impact that adsorptive mutation and N-linked glycosylation have on receptor-binding, viral fitness, and antigenicity. We utilize the H9N2 A/chicken/Pakistan/SKP-827/16 virus which naturally contains HA residue T180 that we have previously shown to be an adsorptive mutant relative to virus with T180A. We find that the addition of N-linked glycans can be beneficial or deleterious to virus replication depending on the background receptor binding avidity. We also find that in some cases, an N-linked glycan can trump the effect of an avidity enhancing substitution with respect to antigenicity. Taken together these data shed light on a potential route to the generation of a virus which is "fit" and able to overcome vaccine pressure.

Indexed as

Amino Acid SubstitutionAdsorptionAnimalsCells, CulturedChickensDogsGenetic FitnessGlycosylationHEK293 CellsHemagglutinin Glycoproteins, Influenza VirusHumansInfluenza A Virus, H9N2 SubtypeMadin Darby Canine Kidney CellsMutagenesis, Site-DirectedVirus ReplicationHemagglutinin Glycoproteins, Influenza Virusantigenic driftavidityglycosylationInfluenzareceptor bindingvirus evolution

Identifiers

PMID33179567
PMCPMC7738305
OpenAlexW3099513325

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.