Evidence map›Paper›PMID 33176674›Full record

ArticleBMC genomics2020

Transcriptome analysis reveals mechanism of early ripening in Kyoho grape with hydrogen peroxide treatment.

Da-Long Guo, Zhen-Guang Wang, Mao-Song Pei, Li-Li Guo, Yi-He Yu

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
6.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 53 citations in OpenAlex.

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  13. Antioxidants (Basel, Switzerland) · 2023
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  14. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Da-Long GuoCollege of Forestry, Henan University of Science and Technology, Luoyang, 471023, Henan Province, China. guodalong@haust.edu.cn.
Zhen-Guang WangCollege of Forestry, Henan University of Science and Technology, Luoyang, 471023, Henan Province, China.
Mao-Song PeiCollege of Forestry, Henan University of Science and Technology, Luoyang, 471023, Henan Province, China.
Li-Li GuoHenan Engineering Technology Research Center of Quality Regulation and Controlling of Horticultural Plants, Luoyang, 471023, Henan Province, China.
Yi-He YuCollege of Forestry, Henan University of Science and Technology, Luoyang, 471023, Henan Province, China.
Henan University of Science and Technology · CN

Funding

Key R & D and Promotion Projects in Henan Province 202102110043Leading Talents Fund in Science and Technology Innovation in Henan Province 194200510007National Key Research and Development Program of China 2018YFD1000105National Natural Science Foundation of China NSFC: 31672106, U1904113
6 · The paper itself

Abstract

backgroundIn a previous study, the early ripening of Kyoho grape following H

resultsIn the comparison of treatment and control groups, 406 genes were up-regulated and 683 were down-regulated. Time course sequencing (TCseq) analysis showed that the expression patterns of most of the genes were similar between the treatment and control, except for some genes related to chlorophyll binding and photosynthesis. Differential expression analysis and the weighted gene co-expression network were used to screen significantly differentially expressed genes and hub genes associated with oxidative stress (heat shock protein, HSP), cell wall deacetylation (GDSL esterase/lipase, GDSL), cell wall degradation (xyloglucan endotransglucosylase/ hydrolase, XTH), and photosynthesis (chlorophyll a-b binding protein, CAB1). Gene expression was verified with RT-qPCR, and the results were largely consistent with those of RNA sequencing.

conclusionsThe RNA-sequencing analysis indicated that H

Indexed as

VitisChlorophyll AFruitGene Expression ProfilingGene Expression Regulation, PlantHydrogen PeroxideTranscriptomeChlorophyll AHydrogen PeroxideEarly ripeningGrapeHydrogen peroxideKyohoRNA sequencing

Identifiers

PMID33176674
PMCPMC7657363
OpenAlexW3101734839

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.