Evidence map›Paper›PMID 33174903›Full record

ArticleMemorias do Instituto Oswaldo Cruz2020

Detection of Bacillus anthracis and Bacillus anthracis-like spores in soil from state of Rio de Janeiro, Brazil.

Jacqueline Rs Salgado, Leon Rabinovitch, Maria de Fátima Dos S Gomes, Regina Celia da Sb Allil, Marcelo Martins Werneck, Rafael B Rodrigues, Renata C Picão, Fernanda Baptista de Oliveira Luiz, Adriana M Vivoni

Open access · diamondAbstract read
In one paragraph

Article in Memorias do Instituto Oswaldo Cruz, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it, 16 citations in OpenAlex.

  1. Pooled it
  2. Article
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  5. Whole genome sequence data ofData in brief · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Jacqueline Rs SalgadoExército Brasileiro, Instituto de Defesa Química, Biológica, Radiológica e Nuclear, Laboratório de Defesa Biológica, Rio de Janeiro, RJ, Brasil.ORCID http://orcid.org/0000-0002-4664-9222
Leon RabinovitchFundação Oswaldo Cruz-Fiocruz, Instituto Oswaldo Cruz, Laboratório de Fisiologia Bacteriana/Laboratório de Referência Nacional para Carbúnculo, Rio de Janeiro, RJ, Brasil.
Maria de Fátima Dos S GomesExército Brasileiro, Instituto de Defesa Química, Biológica, Radiológica e Nuclear, Laboratório de Defesa Biológica, Rio de Janeiro, RJ, Brasil.
Regina Celia da Sb AllilUniversidade Federal do Rio de Janeiro, Instituto Alberto Luiz Coimbra de Pós-Graduação e Pesquisa de Engenharia, Laboratório de Instrumentação e Fotônica, Rio de Janeiro, RJ, Brasil.
Marcelo Martins WerneckUniversidade Federal do Rio de Janeiro, Instituto Alberto Luiz Coimbra de Pós-Graduação e Pesquisa de Engenharia, Laboratório de Instrumentação e Fotônica, Rio de Janeiro, RJ, Brasil.
Rafael B RodriguesExército Brasileiro, Instituto de Defesa Química, Biológica, Radiológica e Nuclear, Laboratório de Defesa Biológica, Rio de Janeiro, RJ, Brasil.
Renata C PicãoUniversidade Federal do Rio de Janeiro, Instituto de Microbiologia Paulo de Góes, Rio de Janeiro, RJ, Brasil.
Fernanda Baptista de Oliveira LuizFundação Oswaldo Cruz-Fiocruz, Instituto Oswaldo Cruz, Laboratório de Fisiologia Bacteriana/Laboratório de Referência Nacional para Carbúnculo, Rio de Janeiro, RJ, Brasil.
Adriana M VivoniFundação Oswaldo Cruz-Fiocruz, Instituto Oswaldo Cruz, Laboratório de Fisiologia Bacteriana/Laboratório de Referência Nacional para Carbúnculo, Rio de Janeiro, RJ, Brasil.
Fundação Oswaldo Cruz · BRInstituto de Biologia do Exército · BRUniversidade Federal do Rio de Janeiro · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBacillus anthracis is the aetiologic agent of anthrax, a re-emerging, septicaemic, haemorrhagic and lethal disease that affects humans, domestic ruminants and wildlife. Plasmids pXO1 and pXO2 are attributes that confer pathogenicity to B. anthracis strains. This bacterium was used as biological weapon in the World Wars and in the biological attack in the United States of America at 2001. B. anthracis is classified as a Tier 1 bioterrorism agent by the Centers for Diseases Control and Prevention. Anthrax is recognised as a re-emerging disease. Several studies concerning the dynamics of B. anthracis cycle in soil revealed that nonpathogenic B. anthracis strains due to lack of pXO2 plasmid are commonly found in some types of soil.

objectivesThis study aimed isolation and identification of B. anthracis spores in soil samples of the state of Rio de Janeiro, Brazil.

methodsPhenotypic and genotypic approaches were used to identify isolates including MALDI-TOF/MS, motility test, susceptibility to gamma phage and penicillin, survey for pag and cap genes as surrogates of pXO1 and pXO2 plasmids, respectively, and sequencing of 16SrRNA-encoding gene. Physicochemical analysis of the soil samples were carried out to describe soil characteristics.

findingsWe observed the presence of one B. anthracis pXO1+ and pXO2- isolated from clay loam soil; one B. anthracis-like strain pXO1+ and pXO2-isolated from loamy sand; and 10 Bacillus spp. strains sensitive to phage-gamma that need better characterisation to define which their species were recovered from loamy sand. MAIN

conclusionsThis work showed promising results and it was the first study to report results from an active surveillance for B. anthracis in Brazil.

Indexed as

Soil MicrobiologySpores, BacterialAntigens, BacterialBacillus anthracisBacterial ToxinsBrazilDNA, BacterialHumansPlasmidsPolymerase Chain ReactionSequence Analysis, DNASoilVirulenceVirulence Factorsanthrax toxinAntigens, BacterialBacterial ToxinsDNA, BacterialSoilVirulence Factors

Identifiers

PMID33174903
PMCPMC7646210
OpenAlexW3096440918

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.