Evidence map›Paper›PMID 33173606›Full record

ArticleTranslational vision science & technology2020

Pathological-Corneas Layer Segmentation and Thickness Measurement in OCT Images.

Amr Elsawy, Giovanni Gregori, Taher Eleiwa, Mohamed Abdel-Mottaleb, Mohamed Abou Shousha

Abstract read
In one paragraph

Article in Translational vision science & technology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Amr ElsawyBascom Palmer Eye Institute, Miller School of Medicine, University of Miami, Miami, FL, USA.
Giovanni GregoriBascom Palmer Eye Institute, Miller School of Medicine, University of Miami, Miami, FL, USA.
Taher EleiwaBascom Palmer Eye Institute, Miller School of Medicine, University of Miami, Miami, FL, USA.
Mohamed Abdel-MottalebElectrical and Computer Engineering, University of Miami, Miami, FL, USA.
Mohamed Abou ShoushaBascom Palmer Eye Institute, Miller School of Medicine, University of Miami, Miami, FL, USA.

Funding

Shared Equipment ModuleP30EY014801 · NEI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI Marco Ruggeri · 2004 to 2026
$12.2M
Endothelium/Descemet's membrane Complex Optical TomographyK23EY026118 · NEI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI ABOU SHOUSHA, MOHAMED FADEL · 2016 to 2020
$1.1M
NEI NIH HHS K23 EY026118NEI NIH HHS P30 EY014801
6 · The paper itself

Abstract

Purpose: The purpose of this study was to propose a new algorithm for the segmentation and thickness measurement of pathological corneas with irregular layers using a two-stage graph search and ray tracing. Methods: In the first stage, a graph, with only gradient edge-cost, is used to segment the air-epithelium and endothelium-aqueous boundaries. In the second stage, a graph, with gradient, directional, and multiplier edge-cost, is used to correct segmentation. The optical coherence tomography (OCT) image is flattened using the air-epithelium boundary and a graph search is used to segment the epithelium-Bowman's and Bowman's-stroma boundaries. Then, the OCT image is flattened using the endothelium-aqueous boundary and a graph search is used to segment the Descemet's membrane. Ray tracing is used to correct the inter-boundary distances, then the thickness is measured using the shortest distance. The proposed algorithm was trained and evaluated using 190 OCT images manually segmented by trained operators. Results: The mean and standard deviation of the unsigned errors of the algorithm-operator and inter-operator were 0.89 ± 1.03 and 0.77 ± 0.68 pixels in segmentation and 3.62 ± 3.98 and 2.95 ± 2.52 µm in thickness measurement. Conclusions: Our proposed algorithm can produce accurate segmentation and thickness measurements compared with the manual operators. Translational Relevance: Our algorithm could be potentially useful in the clinical practice.

Indexed as

CorneaTomography, Optical CoherenceAlgorithmscorneaoptical coherence tomography (OCT) imagingray tracingsegmentation

Identifiers

PMID33173606
PMCPMC7594599

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.