Evidence map›Paper›PMID 33172895›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2021

A Novel Neoplastic Fusion Transcript,

Chia-Chia Liu, Jamunarani Veeraraghavan, Ying Tan, Jin-Ah Kim, Xian Wang, Suet Kee Loo, Sanghoon Lee, Yiheng Hu, Xiao-Song Wang

Open access · bronzeAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.9field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Characteristics of fusion genes in breast cancer.Cancer cell international · 2026
    Review
  3. Review
  4. Article
  5. Article
  6. OncogenicMedComm · 2024
    Article
  7. Article
  8. Article
  9. 3'-sulfated LewisFrontiers in cell and developmental biology · 2023
    Review
  10. Article
  11. Article
  12. Review
  13. Cholangiocarcinoma and liver transplantation: What we know so far?World journal of gastrointestinal pathophysiology · 2021
    Review
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Chia-Chia Liu *UPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, Pennsylvania.
Jamunarani Veeraraghavan *Lester & Sue Smith Breast Center, Baylor College of Medicine, Houston, Texas.
Ying TanLester & Sue Smith Breast Center, Baylor College of Medicine, Houston, Texas.
Jin-Ah KimLester & Sue Smith Breast Center, Baylor College of Medicine, Houston, Texas.
Xian WangUPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, Pennsylvania.
Suet Kee LooUPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, Pennsylvania.
Sanghoon LeeUPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, Pennsylvania.
Yiheng HuUPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, Pennsylvania.
Xiao-Song WangUPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, Pennsylvania. xiaosongw@pitt.edu.
Baylor College of Medicine · US

Funding

VECTOR CORE FACILITYP30CA047904 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Jessie Nedrow · 1988 to 2026
$158.0M
Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI DAVID R ROWLEY · 2007 to 2026
$73.9M
RPCI-UPCI Ovarian Cancer SPOREP50CA159981 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI MOYSICH, KIRSTEN B. · 2013 to 2025
$19.6M
CHARACTERIZATION OF RECURRENT ADJACENT GENE TRANSLOCATIONS IN BREAST CANCERR01CA183976 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI WANG, XIAOSONG · 2014 to 2019
$1.6M
Integrative Consig: NLK as Attractive Drug Target for Intractable Breast CancerR01CA181368 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI WANG, XIAOSONG · 2014 to 2018
$1.6M
Characterization of EPHA3 intragenic rearrangements in high-grade serous carcinoma progression and recurrenceR21CA237964 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI WANG, XIAOSONG · 2020 to 2021
$402k
NCI NIH HHS P30 CA047904NCI NIH HHS P30 CA125123NCI NIH HHS P50 CA159981NCI NIH HHS R01 CA181368NCI NIH HHS R01 CA183976NCI NIH HHS R21 CA237964
6 · The paper itself

Abstract

purposeLuminal B breast tumors are more aggressive estrogen receptor-positive (ER EXPERIMENTAL

designWe performed large-scale RNA sequencing analysis to identify chimerical transcripts preferentially expressed in luminal B breast cancer. The lead candidate was validated by reverse transcription PCR in breast cancer tissues. The effects of inducible ectopic expression or genetic silencing were assessed by phenotypic assays such as MTS, transwell, and transendothelial migration assays, and by clonogenic assays to assess MEK inhibitor sensitivity. Subcellular fractionation, Western blots, and immunoprecipitation were performed to characterize the protein products and elucidate the engaged mechanisms.

resultsHere we report a novel tumor-specific chimeric transcript

conclusionsThis discovery sheds light on a new area of molecular pathobiology of luminal B tumors and implies potential new therapeutic opportunities for more aggressive breast tumors overexpressing this fusion.

Indexed as

BreastBreast NeoplasmsCell Line, TumorDatasets as TopicDNA-Binding ProteinsDrug Resistance, NeoplasmDyrk KinasesFemaleGene Expression Regulation, NeoplasticGene Knockdown TechniquesHumansMAP Kinase Signaling SystemMitogen-Activated Protein Kinase KinasesOncogene Proteins, FusionProtein Serine-Threonine KinasesProtein-Tyrosine KinasesDNA-Binding ProteinsDyrk KinasesMitogen-Activated Protein Kinase KinasesOncogene Proteins, FusionProtein Serine-Threonine KinasesProtein-Tyrosine KinasesPyridonesPyrimidinonesRAD51AP1 protein, humanRNA-Binding Proteinstrametinib

Identifiers

PMID33172895
PMCPMC7934498
OpenAlexW3104118318

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.