Evidence map›Paper›PMID 33169935›Full record

ArticleThe plant genome2020

A novel adult plant leaf rust resistance gene Lr2K38 mapped on wheat chromosome 1AL.

Suraj Sapkota, Mohamed Mergoum, Ajay Kumar, Jason D Fiedler, Jerry Johnson, Dan Bland, Benjamin Lopez, Steve Sutton, Bikash Ghimire, James Buck and 2 more

Abstract read
In one paragraph

Article in The plant genome, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Suraj SapkotaInstitute of Plant Breeding, Genetics, and Genomics, University of Georgia, Griffin Campus, Griffin, GA, 30223, USA.ORCID 0000-0003-4480-9963
Mohamed MergoumInstitute of Plant Breeding, Genetics, and Genomics, University of Georgia, Griffin Campus, Griffin, GA, 30223, USA.ORCID 0000-0001-6187-9176
Ajay KumarDepartment of Plant Sciences, North Dakota State University, Fargo, ND, 58102, USA.
Jason D FiedlerUSDA-ARS, Cereal Crops Research Unit, Edward T. Schafer Agricultural Research Center, Fargo, ND, 58102, USA.
Jerry JohnsonDepartment of Crop and Soil Sciences, University of Georgia, Griffin Campus, Griffin, GA, 30223, USA.
Dan BlandDepartment of Crop and Soil Sciences, University of Georgia, Griffin Campus, Griffin, GA, 30223, USA.
Benjamin LopezDepartment of Crop and Soil Sciences, University of Georgia, Griffin Campus, Griffin, GA, 30223, USA.
Steve SuttonDepartment of Crop and Soil Sciences, University of Georgia, Griffin Campus, Griffin, GA, 30223, USA.
Bikash GhimireDepartment of Plant Pathology, University of Georgia, Griffin Campus, Griffin, GA, 30223, USA.
James BuckDepartment of Plant Pathology, University of Georgia, Griffin Campus, Griffin, GA, 30223, USA.
Zhenbang ChenDepartment of Crop and Soil Sciences, University of Georgia, Griffin Campus, Griffin, GA, 30223, USA.
Stephen HarrisonSchool of Plant, Environmental and Soil Sciences, Louisiana State University, Baton Rouge, LA, 70803, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Soft red winter wheat (SRWW) cultivar AGS 2038 has a high level of seedling and adult plant leaf rust (LR) resistance. To map and characterize LR resistance in AGS 2038, a recombinant inbred line (RIL) population consisting of 225 lines was developed from a cross between AGS 2038 and moderately resistant line UGA 111729. The parents and RIL population were phenotyped for LR response in three field environments at Plains and Griffin, GA, in the 2017-2018 and 2018-2019 growing seasons, one greenhouse environment at the adult-plant stage, and at seedling stage. The RIL population was genotyped with the Illumina iSelect 90K SNP marker array, and a total of 7667 polymorphic markers representing 1513 unique loci were used to construct a linkage map. Quantitative trait loci (QTL) analysis detected six QTL, QLr.ags-1AL, QLr.ags-2AS, QLr.ags-2BS1, QLr.ags-2BS2, QLr.ags-2BS3, and QLr.ags-2DS, for seedling and adult plant LR resistance. Of these, the major adult plant leaf rust resistance QTL, QLr.ags-1AL, was detected on all field and greenhouse adult plant tests and explained up to 34.45% of the phenotypic variation. QLr.ags-1AL, tightly flanked by IWB20487 and IWA4022 markers, was contributed by AGS 2038. Molecular marker analysis using a diagnostic marker linked to Lr59 showed that QLr.ags-1AL was different from Lr59, the only known LR resistance gene on 1AL. Therefore, the QTL was temporarily designated as Lr2K38. Lr2K38-linked marker IWB20487 was highly polymorphic among 30 SRWW lines and should be useful for selecting the Lr2K38 in wheat breeding programs.

Indexed as

Disease ResistanceTriticumChromosomesHumansPlant BreedingPlant DiseasesPlant Leaves

Identifiers

PMID33169935
PMCPMC12807417

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.