Evidence map›Paper›PMID 33169018›Full record

ArticleNature structural & molecular biology2021

Reprogramming of the histone H3.3 landscape in the early mouse embryo.

Takashi Ishiuchi, Shusaku Abe, Kimiko Inoue, Wan Kin Au Yeung, Yuka Miki, Atsuo Ogura, Hiroyuki Sasaki

Abstract read
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In one paragraph

Article in Nature structural & molecular biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Epigenetic remodeling during early embryonic development.Frontiers in cell and developmental biology · 2026
    Review
  5. Exit from totipotency in mammals: an epigenetic perspective.Frontiers in cell and developmental biology · 2026
    Review
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  7. Article
  8. Article
  9. Article
  10. Review
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  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Takashi Ishiuchi *Division of Epigenomics and Development, Medical Institute of Bioregulation, Kyushu University, Fukuoka, Japan. ishiuchi@bioreg.kyushu-u.ac.jp.ORCID http://orcid.org/0000-0001-8346-4596
Shusaku Abe *Division of Epigenomics and Development, Medical Institute of Bioregulation, Kyushu University, Fukuoka, Japan.
Kimiko InoueBioresource Engineering Division, RIKEN BioResource Research Center, Ibaraki, Japan.ORCID http://orcid.org/0000-0001-7344-4786
Wan Kin Au YeungDivision of Epigenomics and Development, Medical Institute of Bioregulation, Kyushu University, Fukuoka, Japan.ORCID http://orcid.org/0000-0002-0312-1073
Yuka MikiDivision of Epigenomics and Development, Medical Institute of Bioregulation, Kyushu University, Fukuoka, Japan.
Atsuo OguraBioresource Engineering Division, RIKEN BioResource Research Center, Ibaraki, Japan.
Hiroyuki SasakiDivision of Epigenomics and Development, Medical Institute of Bioregulation, Kyushu University, Fukuoka, Japan. hsasaki@bioreg.kyushu-u.ac.jp.ORCID http://orcid.org/0000-0001-8239-8275

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Epigenetic reprogramming of the zygote involves dynamic incorporation of histone variant H3.3. However, the genome-wide distribution and dynamics of H3.3 during early development remain unknown. Here, we delineate the H3.3 landscapes in mouse oocytes and early embryos. We unexpectedly identify a non-canonical H3.3 pattern in mature oocytes and zygotes, in which local enrichment of H3.3 at active chromatin is suppressed and H3.3 is relatively evenly distributed across the genome. Interestingly, although the non-canonical H3.3 pattern forms gradually during oogenesis, it quickly switches to a canonical pattern at the two-cell stage in a transcription-independent and replication-dependent manner. We find that incorporation of H3.1/H3.2 mediated by chromatin assembly factor CAF-1 is a key process for the de novo establishment of the canonical pattern. Our data suggest that the presence of the non-canonical pattern and its timely transition toward a canonical pattern support the developmental program of early embryos.

Indexed as

AnimalsChromatinChromatin Assembly and DisassemblyEmbryo, MammalianEmbryonic DevelopmentEpigenesis, GeneticExoribonucleasesFemaleGene Expression Regulation, DevelopmentalHistonesMaleMiceMice, Inbred C57BLOocytesOogenesisRepressor ProteinsChromatinCnot7 protein, mouseExoribonucleasesHistonesRepressor Proteins

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.