Evidence map›Paper›PMID 33169015›Full record

ArticleNature methods2020

Targeted deubiquitination rescues distinct trafficking-deficient ion channelopathies.

Scott A Kanner, Zunaira Shuja, Papiya Choudhury, Ananya Jain, Henry M Colecraft

Open access · greenAbstract read
In one paragraph

Article in Nature methods, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
5.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 73 citations in OpenAlex.

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  4. Induced proximity-based therapeutic modalities.Nature reviews. Drug discovery · 2026
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  5. Mapping the Functional Landscape ofmedRxiv : the preprint server for health sciences · 2025
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  14. Targeting the ICirculation research · 2024
    Article
  15. Article
  16. Article
  17. Article
  18. Ion channel trafficking implications in heart failure.Frontiers in cardiovascular medicine · 2024
    Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Scott A KannerDoctoral Program in Neurobiology and Behavior, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA.ORCID http://orcid.org/0000-0002-1579-8858
Zunaira ShujaDepartment of Physiology and Cellular Biophysics, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA.
Papiya ChoudhuryDepartment of Physiology and Cellular Biophysics, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA.
Ananya Jain
Henry M ColecraftDoctoral Program in Neurobiology and Behavior, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA. hc2405@cumc.columbia.edu.ORCID http://orcid.org/0000-0002-2340-8899
Columbia University · US

Funding

Tumor Biology and Microenvironment ProgramP30CA013696 · NCI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI Anil K Rustgi · 1985 to 2026
$115.3M
Clinical and Translational Science AwardUL1TR001873 · NCATS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI REILLY, MUREDACH P · 2016 to 2025
$99.0M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007367 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI REINER, STEVEN L · 1985 to 2021
$25.1M
L-type channel trafficking and modulation in heartR01HL121253 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Henry M. Colecraft, Steven O Marx · 2014 to 2026
$8.4M
Ubiquitin Regulation of K Channels in Health and DiseaseR01HL142111 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI COLECRAFT, HENRY M. · 2018 to 2021
$2.3M
Mechanisms of Long QT Syndrome 1 in HeartR01HL122421 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI COLECRAFT, HENRY M. · 2016 to 2019
$1.8M
Becton Dickinson LSR II Analytical Flow CytometerS10RR027050 · NCRR · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CLYNES, RAPHAEL A. · 2011 to 2011
$413k
Sculpting the ubiquitin status of KCNQ1 in cardiac health and diseaseF30HL140878 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI KANNER, SCOTT A · 2018 to 2020
$121k
NCATS NIH HHS UL1 TR001873NCI NIH HHS P30 CA013696NCRR NIH HHS S10 RR027050NHLBI NIH HHS F30 HL140878NHLBI NIH HHS R01 HL121253NHLBI NIH HHS R01 HL122421NHLBI NIH HHS R01 HL142111NIGMS NIH HHS T32 GM007367
6 · The paper itself

Abstract

Impaired protein stability or trafficking underlies diverse ion channelopathies and represents an unexploited unifying principle for developing common treatments for otherwise dissimilar diseases. Ubiquitination limits ion channel surface density, but targeting this pathway for the purposes of basic study or therapy is challenging because of its prevalent role in proteostasis. We developed engineered deubiquitinases (enDUBs) that enable selective ubiquitin chain removal from target proteins to rescue the functional expression of disparate mutant ion channels that underlie long QT syndrome (LQT) and cystic fibrosis (CF). In an LQT type 1 (LQT1) cardiomyocyte model, enDUB treatment restored delayed rectifier potassium currents and normalized action potential duration. CF-targeted enDUBs synergistically rescued common (ΔF508) and pharmacotherapy-resistant (N1303K) CF mutations when combined with the US Food and Drug Administation (FDA)-approved drugs Orkambi (lumacaftor/ivacaftor) and Trikafta (elexacaftor/tezacaftor/ivacaftor and ivacaftor). Altogether, targeted deubiquitination via enDUBs provides a powerful protein stabilization method that not only corrects diverse diseases caused by impaired ion channel trafficking, but also introduces a new tool for deconstructing the ubiquitin code in situ.

Indexed as

AminophenolsAminopyridinesBenzodioxolesChannelopathiesCystic FibrosisDeubiquitinating EnzymesDrug CombinationsHumansIndolesIon TransportLong QT SyndromeMyocytes, CardiacNedd4 Ubiquitin Protein LigasesPotassium ChannelsPyrazolesPyridinesAminophenolsAminopyridinesBenzodioxolesDeubiquitinating EnzymesDrug Combinationselexacaftor, ivacaftor, tezacaftor drug combinationIndoleslumacaftor, ivacaftor drug combinationNedd4L protein, humanNedd4 Ubiquitin Protein LigasesPotassium ChannelsPyrazolesPyridinesQuinolinesQuinolones

Identifiers

PMID33169015
PMCPMC9335257
OpenAlexW3104957291

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.