Evidence map›Paper›PMID 33168908›Full record

ArticleScientific reports2020

CRISPR/Cas9 as an antiviral against Orthopoxviruses using an AAV vector.

Cathryn M Siegrist, Sean M Kinahan, Taylor Settecerri, Adrienne C Greene, Joshua L Santarpia

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 28 citations in OpenAlex.

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  11. CRISPR/Cas9 for hepatitis B virus infection treatment.Immunity, inflammation and disease · 2023
    Review
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  14. Mpox: transmission dynamics, treatment, and innovations.Therapeutic advances in infectious disease
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Cathryn M SiegristWMD Threats and Aerosol Science, Sandia National Laboratories, Albuquerque, NM, USA. cmsiegr@sandia.gov.
Sean M KinahanUniversity of Nebraska Medical Center, Omaha, NE, USA.
Taylor SettecerriWMD Threats and Aerosol Science, Sandia National Laboratories, Albuquerque, NM, USA.
Adrienne C GreeneTCR Discovery, Gritstone Oncology, Inc., Cambridge, MA, USA.
Joshua L SantarpiaUniversity of Nebraska Medical Center, Omaha, NE, USA.
Sandia National Laboratories · USNational Strategic Research InstituteUniversity of Nebraska Medical Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A vaccine for smallpox is no longer administered to the general public, and there is no proven, safe treatment specific to poxvirus infections, leaving people susceptible to infections by smallpox and other zoonotic Orthopoxviruses such as monkeypox. Using vaccinia virus (VACV) as a model organism for other Orthopoxviruses, CRISPR-Cas9 technology was used to target three essential genes that are conserved across the genus, including A17L, E3L, and I2L. Three individual single guide RNAs (sgRNAs) were designed per gene to facilitate redundancy in rendering the genes inactive, thereby reducing the reproduction of the virus. The efficacy of the CRISPR targets was tested by transfecting human embryonic kidney (HEK293) cells with plasmids encoding both SaCas9 and an individual sgRNA. This resulted in a reduction of VACV titer by up to 93.19% per target. Following the verification of CRISPR targets, safe and targeted delivery of the VACV CRISPR antivirals was tested using adeno-associated virus (AAV) as a packaging vector for both SaCas9 and sgRNA. Similarly, AAV delivery of the CRISPR antivirals resulted in a reduction of viral titer by up to 92.97% for an individual target. Overall, we have identified highly specific CRISPR targets that significantly reduce VACV titer as well as an appropriate vector for delivering these CRISPR antiviral components to host cells in vitro.

Indexed as

CRISPR-Cas SystemsAntiviral AgentsBacterial ProteinsDependovirusGene EditingGenetic VectorsGreen Fluorescent ProteinsHEK293 CellsHumansMpox, MonkeypoxOrthopoxvirusPlasmidsRNA, Guide, CRISPR-Cas SystemsSmallpoxTransfectionVaccinia virusAntiviral AgentsBacterial ProteinsGreen Fluorescent ProteinsRNA, Guide, CRISPR-Cas Systems

Identifiers

PMID33168908
PMCPMC7653928
OpenAlexW3098545459

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.