Evidence map›Paper›PMID 33167354›Full record

ReviewInternational journal of molecular sciences2020

Capturing and Understanding the Dynamics and Heterogeneity of Gene Expression in the Living Cell.

Amparo Pascual-Ahuir, Josep Fita-Torró, Markus Proft

Open access · goldAbstract readReview
In one paragraph

Review in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 33 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Amparo Pascual-AhuirDepartment of Biotechnology, Instituto de Biología Molecular y Celular de Plantas, Universitat Politècnica de València, 46022 Valencia, Spain.
Josep Fita-TorróDepartment of Molecular and Cellular Pathology and Therapy, Instituto de Biomedicina de Valencia IBV-CSIC, 46010 Valencia, Spain.ORCID 0000-0002-1098-6833
Markus ProftDepartment of Molecular and Cellular Pathology and Therapy, Instituto de Biomedicina de Valencia IBV-CSIC, 46010 Valencia, Spain.ORCID 0000-0002-6788-5830
Instituto de Biomedicina de Valencia · ESInstituto de Biología Molecular y Celular de Plantas · ES

Funding

Ministerio de Ciencia, Innovación y Universidades BFU2016-75792-R
6 · The paper itself

Abstract

The regulation of gene expression is a fundamental process enabling cells to respond to internal and external stimuli or to execute developmental programs. Changes in gene expression are highly dynamic and depend on many intrinsic and extrinsic factors. In this review, we highlight the dynamic nature of transient gene expression changes to better understand cell physiology and development in general. We will start by comparing recent in vivo procedures to capture gene expression in real time. Intrinsic factors modulating gene expression dynamics will then be discussed, focusing on chromatin modifications. Furthermore, we will dissect how cell physiology or age impacts on dynamic gene regulation and especially discuss molecular insights into acquired transcriptional memory. Finally, this review will give an update on the mechanisms of heterogeneous gene expression among genetically identical individual cells. We will mainly focus on state-of-the-art developments in the yeast model but also cover higher eukaryotic systems.

Indexed as

Gene ExpressionGenetic HeterogeneityMolecular BiologyAnimalsCell Physiological PhenomenaGene Expression Regulation, DevelopmentalHumansMolecular ImagingSingle-Cell AnalysisTranscription, Geneticgene expressionreporter assayssingle-cell variabilitystress adaptationtranscriptional activationtranscriptional dynamicstranscriptional memory

Identifiers

PMID33167354
PMCPMC7663833
OpenAlexW3096970197

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.