Evidence map›Paper›PMID 33160939›Full record

ArticleDevelopmental biology2021

The type II integral ER membrane protein VAP-B homolog in C. elegans is cleaved to release the N-terminal MSP domain to signal non-cell-autonomously.

Hala Zein-Sabatto, Tim Cole, Hieu D Hoang, Ekta Tiwary, Chenbei Chang, Michael A Miller

Open access · greenAbstract read
In one paragraph

Article in Developmental biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 52% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Hala Zein-SabattoDepartment of Cell, Developmental, and Integrative Biology, University of Alabama at Birmingham, 1900 University Blvd, Birmingham, AL, 35294-0006, USA. Electronic address: hsabatto@uab.edu.
Tim ColeDepartment of Cell, Developmental, and Integrative Biology, University of Alabama at Birmingham, 1900 University Blvd, Birmingham, AL, 35294-0006, USA.
Hieu D HoangDepartment of Cell, Developmental, and Integrative Biology, University of Alabama at Birmingham, 1900 University Blvd, Birmingham, AL, 35294-0006, USA.
Ekta TiwaryDepartment of Cell, Developmental, and Integrative Biology, University of Alabama at Birmingham, 1900 University Blvd, Birmingham, AL, 35294-0006, USA.
Chenbei ChangDepartment of Cell, Developmental, and Integrative Biology, University of Alabama at Birmingham, 1900 University Blvd, Birmingham, AL, 35294-0006, USA.
Michael A MillerDepartment of Cell, Developmental, and Integrative Biology, University of Alabama at Birmingham, 1900 University Blvd, Birmingham, AL, 35294-0006, USA.
University of Alabama at Birmingham · US

Funding

UAB Predoctoral Training Grant in Translational and Molecular SciencesT32GM109780 · NIGMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI PATEL, RAKESH P. · 2015 to 2019
$967k
NIGMS NIH HHS T32 GM109780
6 · The paper itself

Abstract

VAMP/synaptobrevin-associated protein B (VAP-B) is a type II ER membrane protein, but its N-terminal MSP domain (MSPd) can be cleaved and secreted. Mutations preventing the cleavage and secretion of MSPd have been implicated in cases of human neurodegenerative diseases. The site of VAP cleavage and the tissues capable in releasing the processed MSPd are not understood. In this study, we analyze the C. elegans VAP-B homolog, VPR-1, for its processing and secretion from the intestine. We show that intestine-specific expression of an N-terminally FLAG-tagged VPR-1 rescues underdeveloped gonad and sterility defects in vpr-1 null hermaphrodites. Immunofluorescence studies reveal that the tagged intestinal expressed VPR-1 is present at the distal gonad. Mass spectrometry analysis of a smaller product of the N-terminally tagged VPR-1 identifies a specific cleavage site at Leu156. Mutation of the leucine results in loss of gonadal MSPd signal and reduced activity of the mutant VPR-1. Thus, we report for the first time the cleavage site of VPR-1 and provide direct evidence that intestinally expressed VPR-1 can be released and signal in the distal gonad. These results establish the foundation for further exploration of VAP cleavage, MSPd secretion, and non-cell-autonomous signaling in development and diseases.

Indexed as

AnimalsAnimals, Genetically ModifiedCaenorhabditis elegansCaenorhabditis elegans ProteinsEndoplasmic ReticulumGenes, HelminthGonadsHelminth ProteinsHermaphroditic OrganismsInfertilityIntestinesLeucineMembrane ProteinsPhenotypePoint MutationProtein DomainsCaenorhabditis elegans ProteinsHelminth ProteinsLeucinemajor sperm protein, nematodeMembrane ProteinsVPR-1 protein, C elegansCaenorhabditis elegans developmentGonadMajor sperm proteinMSPNon-cell-autonomous signalingVAPB

Identifiers

PMID33160939
PMCPMC7856274
OpenAlexW3096600361

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.