Evidence map›Paper›PMID 33159787›Full record

ArticleJournal of experimental botany2021

Differential expression of SlKLUH controlling fruit and seed weight is associated with changes in lipid metabolism and photosynthesis-related genes.

Qiang Li, Manohar Chakrabarti, Nathan K Taitano, Yozo Okazaki, Kazuki Saito, Ayed M Al-Abdallat, Esther van der Knaap

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
5.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 35 citations in OpenAlex.

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  5. Development of phytochemical genomics: From decoding metabolome to functional genomics and biotechnology of plant metabolism.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2025
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  6. A chromosome-level genome assembly ofFrontiers in plant science · 2024
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  11. Overexpression of RiceInternational journal of molecular sciences · 2022
    Article
  12. Increasing Fruit Weight by Editing aFrontiers in plant science · 2022
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  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 6 institutions in 4 countries.

Qiang LiState Key Laboratory of North China Crop Improvement and Regulation, Key Laboratory of Vegetable Germplasm Innovation and Utilization of Hebei, Collaborative Innovation Center of Vegetable Industry in Hebei, College of Horticulture, Hebei Agricultural University, Baoding, China.
Manohar ChakrabartiDepartment of Plant and Soil Sciences, University of Kentucky, Lexington, KY, USA.
Nathan K TaitanoInstitute for Plant Breeding, Genetics and Genomics, University of Georgia, Athens, GA, USA.
Yozo OkazakiRIKEN Center for Sustainable Resource Science, Yokohama, Japan.
Kazuki SaitoRIKEN Center for Sustainable Resource Science, Yokohama, Japan.
Ayed M Al-AbdallatSchool of Agriculture, The University of Jordan, Amman, Jordan.
Esther van der KnaapCenter for Applied Genetic Technologies, University of Georgia, Athens, GA, USA.
University of Georgia · USChiba University · JPHebei Agricultural University · CNMie University · JPUniversity of Jordan · JOUniversity of Kentucky · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The sizes of plant organs such as fruit and seed are crucial yield components. Tomato KLUH underlies the locus fw3.2, an important regulator of fruit and seed weight. However, the mechanism by which the expression levels of KLUH affect organ size is poorly understood. We found that higher expression of SlKLUH increased cell proliferation in the pericarp within 5 d post-anthesis in tomato near-isogenic lines. Differential gene expression analyses showed that lower expression of SlKLUH was associated with increased expression of genes involved in lipid metabolism. Lipidomic analysis revealed that repression of SlKLUH mainly increased the contents of certain non-phosphorus glycerolipids and phospholipids and decreased the contents of four unknown lipids. Co-expression network analyses revealed that lipid metabolism was possibly associated with but not directly controlled by SlKLUH, and that this gene instead controls photosynthesis-related processes. In addition, many transcription factors putatively involved in the KLUH pathway were identified. Collectively, we show that SlKLUH regulates fruit and seed weight which is associated with altered lipid metabolism. The results expand our understanding of fruit and seed weight regulation and offer a valuable resource for functional studies of candidate genes putatively involved in regulation of organ size in tomato and other crops.

Indexed as

FruitLipid MetabolismPhotosynthesisSeedsSolanum lycopersicumGene Expression Regulation, PlantPlant ProteinsPlant ProteinsFruit weightKLUHlipid metabolismseed weighttomatotranscription factor

Identifiers

PMID33159787
PMCPMC7904157
OpenAlexW3099855002

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.