Evidence map›Paper›PMID 33159707›Full record

ArticleMolecular genetics & genomic medicine2020

A novel heterozygous variant of the COL4A4 gene in a Chinese family with hematuria and proteinuria leads to focal segmental glomerulosclerosis and chronic kidney disease.

Liang-Liang Fan, Lv Liu, Fang-Mei Luo, Ran Du, Chen-Yu Wang, Yi Dong, Ji-Shi Liu

Open access · goldAbstract readCase Reports
In one paragraph

Article in Molecular genetics & genomic medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. The same heterozygousFrontiers in genetics · 2023
    Article
  2. Article
  3. Novel heterozygous mutation inFrontiers in genetics · 2022
    Article
  4. Case Report: A Novel Heterozygous Mutation ofFrontiers in pediatrics · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Liang-Liang FanDepartment of Nephrology, The Third Xiangya Hospital of Central South University, Changsha, China.ORCID 0000-0001-7431-1838
Lv LiuDepartment of Respiratory Medicine, Diagnosis and Treatment Center of Respiratory Disease, the Second Xiangya Hospital of Central South University, Changsha, Hunan, China.
Fang-Mei LuoDepartment of Cell Biology, The School of Life Sciences, Central South University, Changsha, China.
Ran DuDepartment of Cell Biology, The School of Life Sciences, Central South University, Changsha, China.
Chen-Yu WangDepartment of Cell Biology, The School of Life Sciences, Central South University, Changsha, China.
Yi DongDepartment of Cell Biology, The School of Life Sciences, Central South University, Changsha, China.
Ji-Shi LiuDepartment of Nephrology, The Third Xiangya Hospital of Central South University, Changsha, China.ORCID 0000-0002-3733-5811
Central South University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundFocal segmental glomerulosclerosis (FSGS), as the frequent primary glomerular diseases in adults, accounts for symptomless proteinuria or nephrotic syndrome with or without renal insufficiency. As the crucial lesion of chronic kidney disease (CKD), accumulating evidence from recent studies show that mutations in Collagen-related genes may be responsible for FSGS. The aim of this study was to identify the genetic lesion of a Chinese family with FSGS and CKD.

methodsIn this study, we recruited a Han-Chinese family with unexplained high serum creatinine, hematuria, and proteinuria. Further renal biopsy and renal pathology indicated the diagnosis of FSGS in the proband. Whole-exome sequencing and Sanger sequencing were employed to explore the pathogenic mutation of this family.

resultsA novel heterozygous mutation (NM_000092 c.2030G>A, p.G677D) of the collagen type IV alpha-4 gene (COL4A4) was detected. Co-segregation analysis revealed that the novel mutation was carried by all the five affected individuals and absent in other healthy members as well as in our 200 local control cohorts. Bioinformatics predication indicated that this novel mutation was pathogenic and may disrupt the structure and function of type IV collagen. Simultaneously, this variant is located in an evolutionarily conserved site of COL4A4 protein.

conclusionHere, we identified a novel mutation of COL4A4 in a family with FSGS and CKD. Our study expanded the variants spectrum of the COL4A4 gene and contributed to the genetic counseling and prenatal genetic diagnosis of the family. In addition, we also recommended the new classification of collagen IV nephropathies, which may be a benefit to the diagnosis, target drug treatment, and management of patients with COL4A3/COL4A4 mutations.

Indexed as

AdolescentAdultAgedCollagen Type IVConserved SequenceFemaleGlomerulosclerosis, Focal SegmentalHematuriaHeterozygoteHumansMaleMiddle AgedMutationPedigreeProtein DomainsProteinuriaCOL4A4 protein, humanCollagen Type IVCOL4A4 mutationfocal segmental glomerulosclerosishematuriaproteinuria

Identifiers

PMID33159707
PMCPMC7767549
OpenAlexW3096553757

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.