Evidence map›Paper›PMID 33159466›Full record

ArticleAnnals of neurology2021

A Transcriptome-Based Drug Discovery Paradigm for Neurodevelopmental Disorders.

Ryan S Dhindsa, Anthony W Zoghbi, Daniel K Krizay, Chirag Vasavda, David B Goldstein

Open access · greenAbstract read
In one paragraph

Article in Annals of neurology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Ryan S DhindsaInstitute for Genomic Medicine, Columbia University Irving Medical Center, New York, NY, USA.ORCID 0000-0002-8965-0813
Anthony W ZoghbiInstitute for Genomic Medicine, Columbia University Irving Medical Center, New York, NY, USA.
Daniel K KrizayInstitute for Genomic Medicine, Columbia University Irving Medical Center, New York, NY, USA.
Chirag VasavdaSolomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD, USA.ORCID 0000-0003-4558-4698
David B GoldsteinInstitute for Genomic Medicine, Columbia University Irving Medical Center, New York, NY, USA.
Columbia University Irving Medical Center · USJohns Hopkins University · US

Funding

Medical Scientist Training ProgramT32GM136577 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI ANDREA L COX · 2020 to 2026
$13.4M
PREDOCTORAL TRAINING GRANT IN HUMAN GENETICS &DEVELOPMET32GM007088 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI SHEN, MICHAEL M. · 1985 to 2020
$7.1M
Uncovering the Genetic Architecture of Extremely Treatment-Resistant Schizophrenia Using Whole Genome SequencingK23MH121669 · NIMH · NEW YORK STATE PSYCHIATRIC INSTITUTE DBA RESEARCH FOUNDATION FOR MENTAL HYGIENE, INC · PI ZOGHBI, ANTHONY · 2020 to 2024
$978k
NIGMS NIH HHS T32 GM007088NIGMS NIH HHS T32 GM136577NIMH NIH HHS K23 MH121669
6 · The paper itself

Abstract

Advances in genetic discoveries have created substantial opportunities for precision medicine in neurodevelopmental disorders. Many of the genes implicated in these diseases encode proteins that regulate gene expression, such as chromatin-associated proteins, transcription factors, and RNA-binding proteins. The identification of targeted therapeutics for individuals carrying mutations in these genes remains a challenge, as the encoded proteins can theoretically regulate thousands of downstream targets in a considerable number of cell types. Here, we propose the application of a drug discovery approach originally developed for cancer called "transcriptome reversal" for these neurodevelopmental disorders. This approach attempts to identify compounds that reverse gene-expression signatures associated with disease states. ANN NEUROL 2021;89:199-211.

Indexed as

AnimalsAnticonvulsantsAntidepressive AgentsAnti-Inflammatory Agents, Non-SteroidalAntipsychotic AgentsCarbamazepineComputer SimulationDrug DiscoveryEpirizoleGene Expression ProfilingGene Expression RegulationHumansInduced Pluripotent Stem CellsMCF-7 CellsMiceNaloxoneAnticonvulsantsAntidepressive AgentsAnti-Inflammatory Agents, Non-SteroidalAntipsychotic AgentsCarbamazepineEpirizoleNaloxoneNarcotic AntagonistsPerphenazineRisperidoneTrazodoneTrimipramine

Identifiers

PMID33159466
PMCPMC8122510
OpenAlexW3096214162

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.