Evidence map›Paper›PMID 33159255›Full record

ArticleMolecular genetics and genomics : MGG2021

Compound heterozygous PLA2G6 loss-of-function variants in Swaledale sheep with neuroaxonal dystrophy.

Anna Letko, Ben Strugnell, Irene M Häfliger, Julia M Paris, Katie Waine, Cord Drögemüller, Sandra Scholes

Open access · hybridAbstract read
In one paragraph

Article in Molecular genetics and genomics : MGG, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. A missense mutation in theFrontiers in neuroscience · 2024
    Article
  3. IndependentGenes · 2023
    Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Anna Letko *Institute of Genetics, Vetsuisse Faculty, University of Bern, 3001, Bern, Switzerland.ORCID http://orcid.org/0000-0002-6521-1285
Ben Strugnell *Farm Post Mortems Ltd, Hamsterley House, Hamsterley, Bishop Auckland, Durham, DL13 3QF, UK.
Irene M HäfligerInstitute of Genetics, Vetsuisse Faculty, University of Bern, 3001, Bern, Switzerland.ORCID http://orcid.org/0000-0002-5648-963X
Julia M ParisInstitute of Genetics, Vetsuisse Faculty, University of Bern, 3001, Bern, Switzerland.ORCID http://orcid.org/0000-0002-0672-6844
Katie WaineUniversity of Nottingham, College Road, Sutton Bonington, Loughborough, LE12 5RD, UK.
Cord Drögemüller *Institute of Genetics, Vetsuisse Faculty, University of Bern, 3001, Bern, Switzerland. cord.droegemueller@vetsuisse.unibe.ch.ORCID http://orcid.org/0000-0001-9773-522X
Sandra Scholes *SRUC Consulting Veterinary Services, Pentlands Science Park, Bush Estate Loan, Penicuik, Midlothian, EH26 0PZ, UK.ORCID http://orcid.org/0000-0003-3422-5956
University of Bern · CHBishop Auckland Hospital · GBScotland's Rural College · GBUniversity of Nottingham · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sporadic occurrences of neurodegenerative disorders including neuroaxonal dystrophy (NAD) have been previously reported in sheep. However, so far no causative genetic variant has been found for ovine NAD. The aim of this study was to characterize the phenotype and the genetic aetiology of an early-onset neurodegenerative disorder observed in several lambs of purebred Swaledale sheep, a native English breed. Affected lambs showed progressive ataxia and stiff gait and subsequent histopathological analysis revealed the widespread presence of axonal spheroid indicating neuronal degeneration. Thus, the observed clinical phenotype could be explained by a novel form of NAD. After SNP genotyping and subsequent linkage mapping within a paternal half-sib pedigree with a total of five NAD-affected lambs, we identified two loss-of-function variants by whole-genome sequencing in the ovine PLA2G6 gene situated in a NAD-linked genome region on chromosome 3. All cases were carriers of a compound heterozygous splice site variant in intron 2 and a nonsense variant in exon 8. Herein we present evidence for the occurrence of a familial novel form of recessively inherited NAD in sheep due to allelic heterogeneity at PLA2G6. This study reports two pathogenic variants in PLA2G6 causing a novel form of NAD in Swaledale sheep which enables selection against this fatal disorder.

Indexed as

Polymorphism, Single NucleotideAlternative SplicingAmyloid beta-Protein PrecursorAnimalsBase SequenceChromosome MappingChromosomes, MammalianExonsFemaleGene ExpressionGenetic LinkageGroup VI Phospholipases A2HeterozygoteIntronsMaleNeuroaxonal DystrophiesAmyloid beta-Protein PrecursorGroup VI Phospholipases A2Compound heterozygosityNeurogenetic disorderOvis ariesPrecision medicineRare disease

Identifiers

PMID33159255
PMCPMC7840627
OpenAlexW3096804518

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.