Evidence map›Paper›PMID 33159072›Full record

ArticleNature communications2020

Establishment of Neurospora crassa as a model organism for fungal virology.

Shinji Honda, Ana Eusebio-Cope, Shuhei Miyashita, Ayumi Yokoyama, Annisa Aulia, Sabitree Shahi, Hideki Kondo, Nobuhiro Suzuki

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
5.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Argonaute-independent, Dicer-dependent antiviral defense against RNA viruses.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. RNA interference ofFrontiers in microbiology · 2023
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Shinji HondaFaculty of Medical Sciences, University of Fukui, Fukui, 910-1193, Japan.
Ana Eusebio-CopeInstitute of Plant Science and Resources, Okayama University, Kurashiki, Okayama, 710-0046, Japan.
Shuhei MiyashitaGraduate School of Agricultural Science, Tohoku University, 468-1, Aramaki-Aza- Aoba, Sendai, 980-0845, Japan.
Ayumi YokoyamaFaculty of Medical Sciences, University of Fukui, Fukui, 910-1193, Japan.
Annisa AuliaInstitute of Plant Science and Resources, Okayama University, Kurashiki, Okayama, 710-0046, Japan.
Sabitree ShahiInstitute of Plant Science and Resources, Okayama University, Kurashiki, Okayama, 710-0046, Japan.ORCID 0000-0002-7423-3064
Hideki KondoInstitute of Plant Science and Resources, Okayama University, Kurashiki, Okayama, 710-0046, Japan.
Nobuhiro SuzukiInstitute of Plant Science and Resources, Okayama University, Kurashiki, Okayama, 710-0046, Japan. nsuzuki@okayama-u.ac.jp.ORCID 0000-0003-0097-9856
Okayama University · JPUniversity of Fukui · JPOkayama University of Science · JPTohoku University · JP

Funding

Tools for Functional Analysis and Cell BiologyP01GM068087 · NIGMS · DARTMOUTH COLLEGE · PI DUNLAP, JAY C. · 2004 to 2013
$19.3M
NIGMS NIH HHS P01 GM068087
6 · The paper itself

Abstract

The filamentous fungus Neurospora crassa is used as a model organism for genetics, developmental biology and molecular biology. Remarkably, it is not known to host or to be susceptible to infection with any viruses. Here, we identify diverse RNA viruses in N. crassa and other Neurospora species, and show that N. crassa supports the replication of these viruses as well as some viruses from other fungi. Several encapsidated double-stranded RNA viruses and capsid-less positive-sense single-stranded RNA viruses can be experimentally introduced into N. crassa protoplasts or spheroplasts. This allowed us to examine viral replication and RNAi-mediated antiviral responses in this organism. We show that viral infection upregulates the transcription of RNAi components, and that Dicer proteins (DCL-1, DCL-2) and an Argonaute (QDE-2) participate in suppression of viral replication. Our study thus establishes N. crassa as a model system for the study of host-virus interactions.

Indexed as

Fungal ProteinsNeurospora crassaRNA VirusesVirus ReplicationFungal Proteins

Identifiers

PMID33159072
PMCPMC7648066
OpenAlexW3095917138

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.