Evidence map›Paper›PMID 33156865›Full record

ArticlePloS one2020

NMR spectroscopy analysis reveals differential metabolic responses in arabidopsis roots and leaves treated with a cytokinesis inhibitor.

Thomas E Wilkop, Minmin Wang, Angelo Heringer, Jaideep Singh, Florence Zakharov, Viswanathan V Krishnan, Georgia Drakakaki

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Thomas E WilkopLight Microscopy Core/ Department of Physiology, University of Kentucky, Lexington, KY, United States of America.
Minmin WangDepartment of Plant Sciences, University of California, Davis, CA, United States of America.ORCID 0000-0001-9545-7895
Angelo HeringerDepartment of Plant Sciences, University of California, Davis, CA, United States of America.
Jaideep SinghDepartment of Chemistry, California State University, Fresno, CA, United States of America.
Florence ZakharovDepartment of Plant Sciences, University of California, Davis, CA, United States of America.
Viswanathan V KrishnanDepartment of Chemistry, California State University, Fresno, CA, United States of America.
Georgia DrakakakiDepartment of Plant Sciences, University of California, Davis, CA, United States of America.
Plant (United States) · USCalifornia State University, Fresno · USUniversity of California Davis Medical Center · USUniversity of Kentucky · US

Funding

Introduction to Quantitative Genomic Analysis - A CUREs ApproachR25GM131956 · NIGMS · CALIFORNIA STATE UNIVERSITY FRESNO · PI KRISHNAN, VISWANATHAN V · 2019 to 2023
$2.5M
Fresno State and UC Merced Bridges to the Doctorate Program in Biomedical and Behavioral SciencesR25GM115293 · NIGMS · CALIFORNIA STATE UNIVERSITY FRESNO · PI KRISHNAN, VISWANATHAN V, LIWANG, ANDY · 2015 to 2019
$1.2M
EFFECT OF WESTERN DIET IN GASTROINTESTINAL CANCER BY NMR METABOLOMICSSC3GM125546 · NIGMS · CALIFORNIA STATE UNIVERSITY FRESNO · PI KRISHNAN, VISWANATHAN V · 2018 to 2021
$420k
NIGMS NIH HHS R25 GM115293NIGMS NIH HHS R25 GM131956NIGMS NIH HHS SC3 GM125546
6 · The paper itself

Abstract

In plant cytokinesis, de novo formation of a cell plate evolving into the new cell wall partitions the cytoplasm of the dividing cell. In our earlier chemical genomics studies, we identified and characterized the small molecule endosidin-7, that specifically inhibits callose deposition at the cell plate, arresting late-stage cytokinesis in arabidopsis. Endosidin-7 has emerged as a very valuable tool for dissecting this essential plant process. To gain insights regarding its mode of action and the effects of cytokinesis inhibition on the overall plant response, we investigated the effect of endosidin-7 through a nuclear magnetic resonance spectroscopy (NMR) metabolomics approach. In this case study, metabolomics profiles of arabidopsis leaf and root tissues were analyzed at different growth stages and endosidin-7 exposure levels. The results show leaf and root-specific metabolic profile changes and the effects of endosidin-7 treatment on these metabolomes. Statistical analyses indicated that the effect of endosidin-7 treatment was more significant than the developmental impact. The endosidin-7 induced metabolic profiles suggest compensations for cytokinesis inhibition in central metabolism pathways. This study further shows that long-term treatment of endosidin-7 profoundly changes, likely via alteration of hormonal regulation, the primary metabolism of arabidopsis seedlings. Hormonal pathway-changes are likely reflecting the plant's responses, compensating for the arrested cell division, which in turn are leading to global metabolite modulation. The presented NMR spectral data are made available through the Metabolomics Workbench, providing a reference resource for the scientific community.

Indexed as

MetabolomeArabidopsisCytokinesisMagnetic Resonance SpectroscopyPlant LeavesPlant RootsQuinolonesendosidin 7Quinolones

Identifiers

PMID33156865
PMCPMC7647083
OpenAlexW3097127302

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.