Evidence map›Paper›PMID 33155101›Full record

ArticleMicrobial ecology2021

Oral Microbial Species and Virulence Factors Associated with Oral Squamous Cell Carcinoma.

Manolito G Torralba, Gajender Aleti, Weizhong Li, Kelvin Jens Moncera, Yi-Han Lin, Yanbao Yu, Michal M Masternak, Wojciech Golusinski, Pawel Golusinski, Katarzyna Lamperska and 3 more

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in Microbial ecology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 47 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed, 1 pooled it
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 1 synthesis or guideline pooled it, 76 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Review
  5. The Role ofCancers · 2025
    Review
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  7. bioRxiv : the preprint server for biology · 2025
    Article
  8. Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. The role of the microbiome in head and neck squamous cell cancers.European archives of oto-rhino-laryngology : official journal of the European Federation of Oto-Rhino-Laryngological Societies (EUFOS) : affiliated with the German Society for Oto-Rhino-Laryngology - Head and Neck Surgery · 2025
    Review
  18. IntratumoralJournal of oral microbiology · 2025
    Article
  19. The rise and evolving role ofCurrent research in microbial sciences · 2025
    Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Manolito G TorralbaDepartment of Genomic Medicine, J. Craig Venter Institute, 4120 Capricorn Lane, La Jolla, CA, 92037, USA. mtorralb@jcvi.org.ORCID http://orcid.org/0000-0002-6055-1109
Gajender AletiDepartment of Genomic Medicine, J. Craig Venter Institute, 4120 Capricorn Lane, La Jolla, CA, 92037, USA.
Weizhong LiDepartment of Genomic Medicine, J. Craig Venter Institute, 4120 Capricorn Lane, La Jolla, CA, 92037, USA.
Kelvin Jens MonceraDepartment of Genomic Medicine, J. Craig Venter Institute, 4120 Capricorn Lane, La Jolla, CA, 92037, USA.
Yi-Han LinDepartment of Genomic Medicine, J. Craig Venter Institute, 4120 Capricorn Lane, La Jolla, CA, 92037, USA.
Yanbao YuDepartment of Genomic Medicine, J. Craig Venter Institute, 9605 Medical Center Drive Suite 150, Rockville, MD, 20850, USA.
Michal M MasternakBurnett School of Biomedical Sciences, College of Medicine, University of Central Florida, 6900 Lake Nona Blvd, Central Florida Blvd, Orlando, FL, 32827, USA.
Wojciech GolusinskiDepartment of Head and Neck Surgery, Poznan University of Medical Sciences, The Greater Poland Cancer Centre, Garbary 15, 61-866, Poznan, Poland.
Pawel GolusinskiDepartment of Head and Neck Surgery, Poznan University of Medical Sciences, The Greater Poland Cancer Centre, Garbary 15, 61-866, Poznan, Poland.
Katarzyna LamperskaLaboratory of Cancer Genetics, Greater Poland Cancer Centre, 15th Garbary Street, room 5025, 61-866, Poznan, Poland.
Anna EdlundDepartment of Genomic Medicine, J. Craig Venter Institute, 4120 Capricorn Lane, La Jolla, CA, 92037, USA.
Marcelo FreireDepartment of Genomic Medicine, J. Craig Venter Institute, 4120 Capricorn Lane, La Jolla, CA, 92037, USA.
Karen E NelsonDepartment of Genomic Medicine, J. Craig Venter Institute, 4120 Capricorn Lane, La Jolla, CA, 92037, USA.
J. Craig Venter Institute · USPoznan University of Medical Sciences · PLGreater Poland Cancer Center · PLUniversity of Central Florida · US

Funding

Regulation of ChemR23 in Resolution of InflammationR00DE023584 · NIDCR · J. CRAIG VENTER INSTITUTE, INC. · PI FREIRE, MARCELO · 2015 to 2019
$1.2M
NIDCR NIH HHS R00 DE023584
6 · The paper itself

Abstract

The human microbiome has been the focus of numerous research efforts to elucidate the pathogenesis of human diseases including cancer. Oral cancer mortality is high when compared with other cancers, as diagnosis often occurs during late stages. Its prevalence has increased in the USA over the past decade and accounts for over 40,000 new cancer patients each year. Additionally, oral cancer pathogenesis is not fully understood and is likely multifactorial. To unravel the relationships that are associated with the oral microbiome and their virulence factors, we used 16S rDNA and metagenomic sequencing to characterize the microbial composition and functional content in oral squamous cell carcinoma (OSCC) tumor tissue, non-tumor tissue, and saliva from 18 OSCC patients. Results indicate a higher number of bacteria belonging to the Fusobacteria, Bacteroidetes, and Firmicutes phyla associated with tumor tissue when compared with all other sample types. Additionally, saliva metaproteomics revealed a significant increase of Prevotella in five OSCC subjects, while Corynebacterium was mostly associated with ten healthy subjects. Lastly, we determined that there are adhesion and virulence factors associated with Streptococcus gordonii as well as from known oral pathogens belonging to the Fusobacterium genera found mostly in OSCC tissues. From these results, we propose that not only will the methods utilized in this study drastically improve OSCC diagnostics, but the organisms and specific virulence factors from the phyla detected in tumor tissue may be excellent biomarkers for characterizing disease progression.

Indexed as

Carcinoma, Squamous CellHead and Neck NeoplasmsMouth NeoplasmsHumansRNA, Ribosomal, 16SSquamous Cell Carcinoma of Head and NeckVirulence FactorsRNA, Ribosomal, 16SVirulence FactorsFusobacteriumMicrobiomeOral cancerOral microbiomeOral squamous cell carcinomaSequencing

Identifiers

PMID33155101
PMCPMC8551143
OpenAlexW3097218373

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.