Evidence map›Paper›PMID 33154461›Full record

ArticleScientific reports2020

Environmental RNA interference in two-spotted spider mite, Tetranychus urticae, reveals dsRNA processing requirements for efficient RNAi response.

Nicolas Bensoussan, Sameer Dixit, Midori Tabara, David Letwin, Maja Milojevic, Michele Antonacci, Pengyu Jin, Yuka Arai, Kristie Bruinsma, Takeshi Suzuki and 6 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 54 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 5 countries.

Nicolas BensoussanDepartment of Biology, The University of Western Ontario, London, ON, N6A 5B8, Canada.
Sameer DixitDepartment of Biology, The University of Western Ontario, London, ON, N6A 5B8, Canada.
Midori TabaraDepartment of Applied Biological Science, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan.
David LetwinDepartment of Biology, The University of Western Ontario, London, ON, N6A 5B8, Canada.
Maja MilojevicDepartment of Biology, The University of Western Ontario, London, ON, N6A 5B8, Canada.
Michele AntonacciDepartment of Biology, The University of Western Ontario, London, ON, N6A 5B8, Canada.
Pengyu JinDepartment of Biology, The University of Western Ontario, London, ON, N6A 5B8, Canada.
Yuka AraiGraduate School of Bio-applications and Systems Engineering, Tokyo University of Agriculture and Technology, Koganei, Tokyo, 184-8588, Japan.
Kristie BruinsmaDepartment of Biology, The University of Western Ontario, London, ON, N6A 5B8, Canada.
Takeshi SuzukiDepartment of Applied Biological Science, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan.
Toshiyuki FukuharaDepartment of Applied Biological Science, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan.
Vladimir ZhurovDepartment of Biology, The University of Western Ontario, London, ON, N6A 5B8, Canada.
Sven GeibelDivision Crop Science, Research and Development, Bayer AG, Monheim, Germany.
Ralf NauenDivision Crop Science, Research and Development, Bayer AG, Monheim, Germany.
Miodrag GrbicDepartment of Biology, The University of Western Ontario, London, ON, N6A 5B8, Canada. mgrbic@uwo.ca.
Vojislava GrbicDepartment of Biology, The University of Western Ontario, London, ON, N6A 5B8, Canada. vgrbic@uwo.ca.
Western University · CATokyo University of Agriculture and Technology · JPBayer (Germany) · DEInstituto de Ciencias de la Vid y del Vino · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Comprehensive understanding of pleiotropic roles of RNAi machinery highlighted the conserved chromosomal functions of RNA interference. The consequences of the evolutionary variation in the core RNAi pathway genes are mostly unknown, but may lead to the species-specific functions associated with gene silencing. The two-spotted spider mite, Tetranychus urticae, is a major polyphagous chelicerate pest capable of feeding on over 1100 plant species and developing resistance to pesticides used for its control. A well annotated genome, susceptibility to RNAi and economic importance, make T. urticae an excellent candidate for development of an RNAi protocol that enables high-throughput genetic screens and RNAi-based pest control. Here, we show that the length of the exogenous dsRNA critically determines its processivity and ability to induce RNAi in vivo. A combination of the long dsRNAs and the use of dye to trace the ingestion of dsRNA enabled the identification of genes involved in membrane transport and 26S proteasome degradation as sensitive RNAi targets. Our data demonstrate that environmental RNAi can be an efficient reverse genetics and pest control tool in T. urticae. In addition, the species-specific properties together with the variation in the components of the RNAi machinery make T. urticae a potent experimental system to study the evolution of RNAi pathways.

Indexed as

RNA, Double-StrandedRNA InterferenceAnimalsBiological TransportGene SilencingProteasome Endopeptidase ComplexTetranychidaeProteasome Endopeptidase ComplexRNA, Double-Stranded

Identifiers

PMID33154461
PMCPMC7644771
OpenAlexW3097091671

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.